Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3592g00037 ATGGAACAGTGGGGTGGTCATCATCGAGTCTTGTTCATTGGTCAGCGGGAGGAAGATGGAAGTCAAGTTCCTTCTGATATTTCTAAAGAAGAGGAATCAAACGATGAAGAAGAAAAAATCATTAAAACTGAACCTGTCTTTACACCAGAAATTAAGAAAAGGAAGCGCCTTAGCCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCATGTGAGAGGCAAAGCATTAGCAAGCTCAAGACAAAGAAACATGAAAGTAGGGACAGATGGTCAATGGAGAGGTATAAGTTGGCTGAGAAAAACATGTGGGAGGTCTTAAAAGCTGAAGGTGCAACTTTTGAAAACCCAATAACCCGACCTGCATTAAGAAATGCTGCCCGTAAACACATTGGTGATACTGGACTTTTAGATCACTTACTGAAGCACATTGATGGTAAGGTGGCACCTGGAGGAAACGAGCGTTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAATGCTGACTTGGAAAAGGTCCGTCAAGAGGCAGGGGTGCAGGACCCTTACTGGATACCACCACCTGCATTTAGGGCAGGCAGTGGCCCCTCTCAGAATACTGATTCTTCTGGTGAATTGAAACTGCTTAAAATAGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAACAAGAGAAAAATGAAATTAGTCTGAAGTCTCACAAGGAATTTGTTAAGTGGAAAGCTATGACTGAATGTCGCCTAACTGAAATCATGGCTTCTTTGAATGGTGTGCAGGGCAAGTATGGTGAATTTGTGACTTGGAAAACTAGAGTTGAGGAACAGCTTGTGGAAATAACAAATAAATTGAGTGATCTCCAAGCATCAAGGGAATGCACCACTTTTAGTCCTCCTTCAGAAAGATGGAAAGATTGGATAGAAAGCACCAACCTAGACAATATTCAGGAAGATGAATTTGCAACTTGGATTGGGAGTTCAGAGTTACTTAATGTTCCCCAAGAGGCTGTGCTTAAAGACCCCAACTCAGCCATACCAACTCAGCTACTTAATGAAGAACTGACTAACAAGAAGAGTGATGTGTTGGCGTTGGTGCCCACGAGACAAAAAGATCAACCTAATGTTACCCCAGATTCTTCTGCAACCGTGAATTCAAAGTCAGACCTTGATAGCTCATTGGTAATGTTTCAGGAGATGTTTATGGATATATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGTTGGACATATCAAATACTGTATATGGTATGCTGGCAATGAAGTAG 1305 0.4192 MEQWGGHHRVLFIGQREEDGSQVPSDISKEEESNDEEEKIIKTEPVFTPEIKKRKRLSLSQLREVKEESCERQSISKLKTKKHESRDRWSMERYKLAEKNMWEVLKAEGATFENPITRPALRNAARKHIGDTGLLDHLLKHIDGKVAPGGNERFRRWFNTNGIMEYWLENADLEKVRQEAGVQDPYWIPPPAFRAGSGPSQNTDSSGELKLLKIEMAQMKKDMQELIAKKQEKNEISLKSHKEFVKWKAMTECRLTEIMASLNGVQGKYGEFVTWKTRVEEQLVEITNKLSDLQASRECTTFSPPSERWKDWIESTNLDNIQEDEFATWIGSSELLNVPQEAVLKDPNSAIPTQLLNEELTNKKSDVLALVPTRQKDQPNVTPDSSATVNSKSDLDSSLVMFQEMFMDIFKWKEKMEQQLLDISNTVYGMLAMK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3592g00037 434 Coils Coil 276 296 - -
Gabi3592g00037 434 Coils Coil 209 236 - -
Gabi3592g00037 434 MobiDBLite consensus disorder prediction 22 38 - -
Gabi3592g00037 434 PANTHER PROTEIN DYAD 1 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gabi3592g00037 434 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3592g00037 Gabi-Chr3592 389978 393611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3592g00037 41 170 PHD Transcription Factor Family AT5G22260 35.606 8.16e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3592g00037 - - gmx:100806484 701.819