Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3592g00035 ATGGAACAGTGGGGTGGTCATCATCGAGTCTTGTTCATTGGTCAGCGGGAGGAAGATGGAAGTCAAGTTCCTTCTGATATTTCTAAAGAAGAGGAATCAAACGATGAAGAAGAAAAAATCATTAAAACTGAACCTGTCTTTACACCAGAAATTAAGAAAAGGAAGCGCCTTAGCCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCATGTGAGAGGCAAAGCATTAGCAAGCTCAAGACAAAGAAACATGAAAGTAGGGACAGATGGTCAATGGAGAGGTATAAGTTGGCTGAGAAAAACATGTGGGAGGTCTTAAAAGCTGAAGGTGCAACTTTTGAAAACCCAATAACCCGACCTGCATTAAGAAATGCTGCCCGTAAACACATTGGTGATACTGGACTTTTAGATCACTTACTGAAGCACATTGATGGTAAGGTGGCACCTGGAGGAAACGAGCGTTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAATGCTGACTTGGAAAAGGTCCGTCAAGAGGCAGGGGTGCAGGACCCTTACTGGATACCACCACCTGCATTTAGGGCAGGCAGTGGCCCCTCTCAGAATACTGATTCTTCTGGTGAATTGAAACTGCTTAAAATAGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAACAAGAGAAAAATGAAATTAGTCTGAAGCAGTCTCACAAGGAATTTGTTAAGTGGAAAGCTATGACTGAATGTCGCCTAACTGAAATCATGGCTTCTTTGAATGGTGTGCAGGGCAAGTATGGTGAATTTGTGACTTGGAAAACTAGAGTTGAGGAACAGCTTGTGGAAATAACAAATAAATTGAGTGATCTCCAAGCATCAAGGGAATGCACCACTTTTAGTCCTCCTTCAGAAAGATGGAAAGATTGGATAGAAAGCACCAACCTAGACAATATTCAGGAAGATGAATTTGCAACTTGGATTGGGAGTTCAGAGTTACTTAATGTTCCCCAAGAGGCTGTGCTTAAAGACCCCAACTCAGCCATACCAACTCAGCTACTTAATGAAGAACTGACTAACAAGAAGAGTGATGTGTTGGCGTTGGTGCCCACGAGACAAAAAGATCAACCTAATGTTACCCCAGATTCTTCTGCAACCGTGAATTCAAAGTCAGACCTTGATAGCTCATTGGTAATGTTTCAGGAGATGTTTATGGATATATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGTTGGACATATCAAATACTGTATATGGTATGCTGGCAATGAAGTAG 1308 0.4197 MEQWGGHHRVLFIGQREEDGSQVPSDISKEEESNDEEEKIIKTEPVFTPEIKKRKRLSLSQLREVKEESCERQSISKLKTKKHESRDRWSMERYKLAEKNMWEVLKAEGATFENPITRPALRNAARKHIGDTGLLDHLLKHIDGKVAPGGNERFRRWFNTNGIMEYWLENADLEKVRQEAGVQDPYWIPPPAFRAGSGPSQNTDSSGELKLLKIEMAQMKKDMQELIAKKQEKNEISLKQSHKEFVKWKAMTECRLTEIMASLNGVQGKYGEFVTWKTRVEEQLVEITNKLSDLQASRECTTFSPPSERWKDWIESTNLDNIQEDEFATWIGSSELLNVPQEAVLKDPNSAIPTQLLNEELTNKKSDVLALVPTRQKDQPNVTPDSSATVNSKSDLDSSLVMFQEMFMDIFKWKEKMEQQLLDISNTVYGMLAMK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3592g00035 435 Coils Coil 277 297 - -
Gabi3592g00035 435 Coils Coil 209 236 - -
Gabi3592g00035 435 MobiDBLite consensus disorder prediction 22 38 - -
Gabi3592g00035 435 PANTHER PROTEIN DYAD 1 433 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gabi3592g00035 435 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3592g00035 Gabi-Chr3592 389977 393611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3592g00035 41 170 PHD Transcription Factor Family AT5G22260 35.606 7.78e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3592g00035 - - gmx:100806484 702.975