Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3592g00031 ATGCACCACTTGTCAGAGCACCCTAATGTTGTGAGGATCCATGGCACCTATGAGGACTCATCTTTTGTTCACTTGGTCATGGAACTCTGTGAAGGTGGCGAGTTATTCGATAGGATCGTGCAGAAAGGGCACTATAGTGAGAGACAAGCTGCAAAGTTGATTAAGACCATTGTTGAGGTTGTTGAGGCTTGTCATTCTCTTGGGGTCATGCATAGAGACCTTAAACCTGAGAACTTTTTGTTTGACACTGTTGAAGAGGATGCTAAACTCAAAACCATTGATTTTGGGTTGTCTGTTTTTTACAAGCCAGGCGAAATCTTTTGTGACGTTGTTGGAAGCCCATACTATGTTGCACCAGAGGTCTTGCACAAGCATTATGGACCTGAATTAGACGTGTGGAGTGCTGGGGTTATTTTGTACATCTTATTAAGTGGGGTGCCACCATTTTGGGCTGGTAGCTATCTGTCATTTATAATTATACAAACTTTGTCTCCTACAGAAACTGAGCAAGGGATCTTCCGACAGATTTTTCTTGGAAGACTTGATTTCCAGTTTGAACCATGGCCTAGCATTTCAGACAGTGCAAAGGATCTAATTCAAAAAATGCTTGATCGAAATCCAAATACAAGGCTTACAGCTCACAAAGTACTCTGCCACCCATGGATTGTTGATGACAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCACGCCTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTACATGTTATTGCAGAGAGGCTATCTGAGGAAGAAATTGGTGGTCTGAAAGAGTTATTCAAGATGATTGATGCTGACAATAGTGGAACTATAACATTTGATGAGCTAAAAGAAGGCTTAAAGCGAGTAGGATCTGAACTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAATGGGACAATTGACTATGGTGAATTCATTGCTGCTACGGTCCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCAGCGTTCTCCTACTTTGACAAAGATGGAAGTGGTTACATAACTATTGATGAGATACAACAAGCTTGTAAGGAGTTTGGTTTGGATGATGTCCATATTGATGAAATGGTCAAGGAAATTGATCAAGACAACGATGGACAAATAGATTATGGGGAATTTGCTGCTATGATGAGAAAGGGCAATGGAGGGATCGGAAGGCGAACCATGAGAAGCACACTCAATTTCATAGATGCTCTGGGAATAATAGGCAATGGATCCACTTAA 1293 0.4068 MHHLSEHPNVVRIHGTYEDSSFVHLVMELCEGGELFDRIVQKGHYSERQAAKLIKTIVEVVEACHSLGVMHRDLKPENFLFDTVEEDAKLKTIDFGLSVFYKPGEIFCDVVGSPYYVAPEVLHKHYGPELDVWSAGVILYILLSGVPPFWAGSYLSFIIIQTLSPTETEQGIFRQIFLGRLDFQFEPWPSISDSAKDLIQKMLDRNPNTRLTAHKVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALHVIAERLSEEEIGGLKELFKMIDADNSGTITFDELKEGLKRVGSELMESEIKDLMDAADIDNNGTIDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQQACKEFGLDDVHIDEMVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRSTLNFIDALGIIGNGST 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3592g00031 430 ProSiteProfiles EF-hand calcium-binding domain profile. 375 406 IPR002048 GO:0005509
Gabi3592g00031 430 ProSitePatterns EF-hand calcium-binding domain. 350 362 IPR018247 -
Gabi3592g00031 430 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Gabi3592g00031 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Gabi3592g00031 430 ProSiteProfiles EF-hand calcium-binding domain profile. 265 300 IPR002048 GO:0005509
Gabi3592g00031 430 Gene3D Transferase(Phosphotransferase) domain 1 36 262 - -
Gabi3592g00031 430 CDD STKc_CAMK 1 221 - -
Gabi3592g00031 430 Pfam EF-hand domain pair 270 330 IPR002048 GO:0005509
Gabi3592g00031 430 Pfam EF-hand domain pair 340 401 IPR002048 GO:0005509
Gabi3592g00031 430 Gene3D - 263 334 - -
Gabi3592g00031 430 ProSiteProfiles EF-hand calcium-binding domain profile. 337 372 IPR002048 GO:0005509
Gabi3592g00031 430 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3592g00031 430 SMART efh_1 305 333 IPR002048 GO:0005509
Gabi3592g00031 430 SMART efh_1 375 403 IPR002048 GO:0005509
Gabi3592g00031 430 SMART efh_1 341 369 IPR002048 GO:0005509
Gabi3592g00031 430 SMART efh_1 269 297 IPR002048 GO:0005509
Gabi3592g00031 430 Pfam Protein kinase domain 2 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3592g00031 430 FunFam Calcium-dependent protein kinase SK5 335 430 - -
Gabi3592g00031 430 ProSitePatterns EF-hand calcium-binding domain. 278 290 IPR018247 -
Gabi3592g00031 430 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 396 - -
Gabi3592g00031 430 SMART serkin_6 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3592g00031 430 FunFam calcium-dependent protein kinase SK5 259 331 - -
Gabi3592g00031 430 ProSiteProfiles EF-hand calcium-binding domain profile. 301 336 IPR002048 GO:0005509
Gabi3592g00031 430 SUPERFAMILY Protein kinase-like (PK-like) 1 242 IPR011009 -
Gabi3592g00031 430 ProSitePatterns EF-hand calcium-binding domain. 314 326 IPR018247 -
Gabi3592g00031 430 SUPERFAMILY EF-hand 261 402 IPR011992 -
Gabi3592g00031 430 CDD EFh 270 329 IPR002048 GO:0005509
Gabi3592g00031 430 ProSitePatterns EF-hand calcium-binding domain. 384 396 IPR018247 -
Gabi3592g00031 430 Gene3D - 335 428 - -
Gabi3592g00031 430 FunFam Calcium-dependent protein kinase SK5 35 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3592g00031 Gabi-Chr3592 341188 346634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3592g00031 1 429 EF-hand Containing Proteins AT1G35670 75.926 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3592g00031 Pkinase 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3592g00031 K13412 - gmx:100790443 778.474