Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3584g00003 | ATGGAAGCACGTTCTACTTTCTCCATTGAAAGATCAAATGCAAGACAACTCAATAACATGGGGATGTCTGGAGTATTTTCTTCATCCTTGCCGGTCCTTCCAACTCCCCTAGACGAGACATGTCCCAAGTTTCCTGATTCACAGCTGGCTTTTGTGGAACACGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTAAATTCCGGTGGAGTAGTTGGGCCCATTTTTTCATCTTCCCCTGGATATTCAACCGATCTCCATCACTCATCCCTTTCACATCATGAAAAACACTCTCGAAATGCTCATTTTATTTCACATTCATCGACTAACATAGTTCCATTATCATATTCTTCAAATACTAGACCTCCAACTTCTACGACATCAAACCATTATTCCAAAGAAAACAGTGCTTCCTGGCAGACAGATTCCCTGGCAAGCTTTCTGGATTTTCCTGCAAATACCTCTATTGATAATAGTCGGGCAGAAAGCAGTGCCCACAATATCAAGGCATCTGAGGAGTATTGTAAACAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTGACTTCTAATTGGAATGACCTTCTTGCTGACAACATTCAAGATCTTGAGCCAAAGGTGCCATTCCAGGTTTCAAAACCATTAACGAAGTTTCCAGAACATCAATGCCAAGGCCATCAACAACTTTCTGCTTCATATGGAGAAAATTGCATTGTTGCTGCCCCTTCTTCCCCAGCAAATTCTGCTCCTGCCAAGCCACGAATGCGTTGGACACCAGAACTTCATGAGGCTTTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAGTACAGGACAGCTAGATATAGACCGGAATCATCTGAAGGAGTCACGGAGAAAAAAGCAAGTTCCATTGAAGAGATGTCATCTCTAGATTTGAAAACTGGTATTGAGATTACTGAAGCTCTACGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGGAATCTACAGCTGCGAATAGAAGAACAAGGAAGATATCTCCAGATGATGTTTGAGAAGCAGTGTAAACCTGGCATTGAAACGTCTAAGGCACCATCATCTAACATTGAGAGTCCATCTGGAGATTATTTGAATTTTACTAAAGATTTTCCTGCCAAAAACGAAATGGAAGCATCACAAGTGGACCATTGCAGGTCAGGACCTGATCAAGCTAATGACAGTACCACCGTTGAGGAAGGCTCACTGGAAATGTGTGGGAAGCATGATTCTCCCAAAACTCATCCTTCTGAGAATCCTATGCAATATGACAATACTATTAATGATAATGATCAAGCCCCGAAGCGTCAAAGAAAAGATGAGTAA | 1464 | 0.418 | MEARSTFSIERSNARQLNNMGMSGVFSSSLPVLPTPLDETCPKFPDSQLAFVEHELMTRPFTHSSYLNSGGVVGPIFSSSPGYSTDLHHSSLSHHEKHSRNAHFISHSSTNIVPLSYSSNTRPPTSTTSNHYSKENSASWQTDSLASFLDFPANTSIDNSRAESSAHNIKASEEYCKQNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKVPFQVSKPLTKFPEHQCQGHQQLSASYGENCIVAAPSSPANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVTEKKASSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETSKAPSSNIESPSGDYLNFTKDFPAKNEMEASQVDHCRSGPDQANDSTTVEEGSLEMCGKHDSPKTHPSENPMQYDNTINDNDQAPKRQRKDE | 487 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3584g00003 | 487 | SUPERFAMILY | Homeodomain-like | 257 | 313 | IPR009057 | - | |
Gabi3584g00003 | 487 | Coils | Coil | 347 | 367 | - | - | |
Gabi3584g00003 | 487 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 233 | 468 | IPR044848 | GO:0003700 | |
Gabi3584g00003 | 487 | MobiDBLite | consensus disorder prediction | 432 | 446 | - | - | |
Gabi3584g00003 | 487 | FunFam | Myb family transcription factor | 258 | 316 | - | - | |
Gabi3584g00003 | 487 | Gene3D | - | 258 | 317 | - | - | |
Gabi3584g00003 | 487 | MobiDBLite | consensus disorder prediction | 423 | 487 | - | - | |
Gabi3584g00003 | 487 | Pfam | Myb-like DNA-binding domain | 261 | 312 | IPR001005 | - | |
Gabi3584g00003 | 487 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 256 | 316 | IPR017930 | - | |
Gabi3584g00003 | 487 | Pfam | MYB-CC type transfactor, LHEQLE motif | 344 | 390 | IPR025756 | - | |
Gabi3584g00003 | 487 | MobiDBLite | consensus disorder prediction | 462 | 476 | - | - | |
Gabi3584g00003 | 487 | MobiDBLite | consensus disorder prediction | 115 | 136 | - | - | |
Gabi3584g00003 | 487 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 259 | 313 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3584g00003 | Gabi-Chr3584 | 13933 | 20772 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3584g00003 | 1 | 388 | G2-like Transcription Factor Family | AT4G28610 | 48.995 | 2.82e-100 | 305 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Gabi3584g00003 | Myb_DNA-binding | 9.2e-09 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3584g00003 | - | - | gmx:100793593 | 727.628 |