Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3584g00003 ATGGAAGCACGTTCTACTTTCTCCATTGAAAGATCAAATGCAAGACAACTCAATAACATGGGGATGTCTGGAGTATTTTCTTCATCCTTGCCGGTCCTTCCAACTCCCCTAGACGAGACATGTCCCAAGTTTCCTGATTCACAGCTGGCTTTTGTGGAACACGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTAAATTCCGGTGGAGTAGTTGGGCCCATTTTTTCATCTTCCCCTGGATATTCAACCGATCTCCATCACTCATCCCTTTCACATCATGAAAAACACTCTCGAAATGCTCATTTTATTTCACATTCATCGACTAACATAGTTCCATTATCATATTCTTCAAATACTAGACCTCCAACTTCTACGACATCAAACCATTATTCCAAAGAAAACAGTGCTTCCTGGCAGACAGATTCCCTGGCAAGCTTTCTGGATTTTCCTGCAAATACCTCTATTGATAATAGTCGGGCAGAAAGCAGTGCCCACAATATCAAGGCATCTGAGGAGTATTGTAAACAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTGACTTCTAATTGGAATGACCTTCTTGCTGACAACATTCAAGATCTTGAGCCAAAGGTGCCATTCCAGGTTTCAAAACCATTAACGAAGTTTCCAGAACATCAATGCCAAGGCCATCAACAACTTTCTGCTTCATATGGAGAAAATTGCATTGTTGCTGCCCCTTCTTCCCCAGCAAATTCTGCTCCTGCCAAGCCACGAATGCGTTGGACACCAGAACTTCATGAGGCTTTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAGTACAGGACAGCTAGATATAGACCGGAATCATCTGAAGGAGTCACGGAGAAAAAAGCAAGTTCCATTGAAGAGATGTCATCTCTAGATTTGAAAACTGGTATTGAGATTACTGAAGCTCTACGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGGAATCTACAGCTGCGAATAGAAGAACAAGGAAGATATCTCCAGATGATGTTTGAGAAGCAGTGTAAACCTGGCATTGAAACGTCTAAGGCACCATCATCTAACATTGAGAGTCCATCTGGAGATTATTTGAATTTTACTAAAGATTTTCCTGCCAAAAACGAAATGGAAGCATCACAAGTGGACCATTGCAGGTCAGGACCTGATCAAGCTAATGACAGTACCACCGTTGAGGAAGGCTCACTGGAAATGTGTGGGAAGCATGATTCTCCCAAAACTCATCCTTCTGAGAATCCTATGCAATATGACAATACTATTAATGATAATGATCAAGCCCCGAAGCGTCAAAGAAAAGATGAGTAA 1464 0.418 MEARSTFSIERSNARQLNNMGMSGVFSSSLPVLPTPLDETCPKFPDSQLAFVEHELMTRPFTHSSYLNSGGVVGPIFSSSPGYSTDLHHSSLSHHEKHSRNAHFISHSSTNIVPLSYSSNTRPPTSTTSNHYSKENSASWQTDSLASFLDFPANTSIDNSRAESSAHNIKASEEYCKQNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKVPFQVSKPLTKFPEHQCQGHQQLSASYGENCIVAAPSSPANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVTEKKASSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETSKAPSSNIESPSGDYLNFTKDFPAKNEMEASQVDHCRSGPDQANDSTTVEEGSLEMCGKHDSPKTHPSENPMQYDNTINDNDQAPKRQRKDE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3584g00003 487 SUPERFAMILY Homeodomain-like 257 313 IPR009057 -
Gabi3584g00003 487 Coils Coil 347 367 - -
Gabi3584g00003 487 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 233 468 IPR044848 GO:0003700
Gabi3584g00003 487 MobiDBLite consensus disorder prediction 432 446 - -
Gabi3584g00003 487 FunFam Myb family transcription factor 258 316 - -
Gabi3584g00003 487 Gene3D - 258 317 - -
Gabi3584g00003 487 MobiDBLite consensus disorder prediction 423 487 - -
Gabi3584g00003 487 Pfam Myb-like DNA-binding domain 261 312 IPR001005 -
Gabi3584g00003 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 316 IPR017930 -
Gabi3584g00003 487 Pfam MYB-CC type transfactor, LHEQLE motif 344 390 IPR025756 -
Gabi3584g00003 487 MobiDBLite consensus disorder prediction 462 476 - -
Gabi3584g00003 487 MobiDBLite consensus disorder prediction 115 136 - -
Gabi3584g00003 487 NCBIfam myb-like DNA-binding domain, SHAQKYF class 259 313 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3584g00003 Gabi-Chr3584 13933 20772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3584g00003 1 388 G2-like Transcription Factor Family AT4G28610 48.995 2.82e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3584g00003 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3584g00003 - - gmx:100793593 727.628