Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3583g00005 ATGGCATTTGAGAAGGTATTCCTCAAATTTGACATGAAAGAAGTTGTACTAGTCAAACCATCAAAACCCACACCTTCTTCTATTCTTTCTATGTCAACATTTGACAATGAACCCGCCCATTATAGTCTTTGTCAAACGGTTCATGTATATAGATCAGCAAATCATGATACCCCTCATGGCCAAGTTCTAGACCCTGTTCATGTGATCAAAGAAGCACTCGCCAAGGTTTTGCTTTATTATTATCCTCTTGCAGGTAGGCTAGTGAAACACGTTGATGGAAAACTTAGAGTCAACTGCAATGCAGACGGTGTTCCATTCTTGGAGGCAATTGCTAACTGCGACCTTACTTCTCTTCATTACTTGGATGGCACTGACACAAAAACTGCGAAAAACTTGGTGCTTGATCTTCCTCATTCTCAAGACGAAAATGGCTACCAACATCCCTTAGTGCTCCAGGTAACTAAATTTCTATGTGGGGGTTTCACAATTGGAATGGGGGCGTCACACGCTATTTGTGATGGCTATGGAGCATCTCAATTCTTCAGAGCCTTAGCTGAACTTGCAAGTGGAAAAAGTGAGCCCTCTGTGAAACCTGTGTGGGATAGAGAGAGACTAGTTGGAACAATAACAAAGCAACCATTGCAAAGCCCCATGGATGAGGCTTGTGCTGCAGTTTCGCCGTTTCTGCCAACAACAGTTCTTATGCATGAATGCTCTAAAGTGGACAGTGAGAGCATAAGAAGACTCAAGATGAGTATGAAGAACGAAAGCTTCACAACTTTTGAATCACTTGCTGCCTATGTGTGGAGGTCAAGAGCCAGAGCCTTAAAACTGAGCTATGATGGGAAAACTATGTTAAACATCATAGTGGGAGTGAGACAGCACTTGCTGGATTCTCCTTTGCCTTATGGCTATTATGGGAATGCTATCGTGGATGCAAATGTTGTGCTAACAGTGAGGGAACTCAACGAACGACCACTATCAGAGATTGTGAAGCTCATCAAGGAGACCAAAAATGCTGCTTTTACCACTGATTATATCAGAAACACAATCAACACTTTGGAGACGAAACAAGTGGATCATAACATGGAAGGTATCGGTGCACTCATGACTTTGACTGAGTGGAAGCATTTGGGTTTCTTGGAAAAGGTAGATTTTGGATGGAAGGAACCTATAAATATAATACCCGCCCCATGCAACATGTTTGAGTCCGTGGATTTGTGCATTTTCGCATCTCCTAATAACTTTGATCCATCAATGAAAGGAGGAGTTAGGATTTTCTCATCCCTCCCTATTGCTGCCATGCCAAAGTTCAGAGAGGAGATGGAAGCTCTCAGGTTAATTAAACCCTAG 1353 0.425 MAFEKVFLKFDMKEVVLVKPSKPTPSSILSMSTFDNEPAHYSLCQTVHVYRSANHDTPHGQVLDPVHVIKEALAKVLLYYYPLAGRLVKHVDGKLRVNCNADGVPFLEAIANCDLTSLHYLDGTDTKTAKNLVLDLPHSQDENGYQHPLVLQVTKFLCGGFTIGMGASHAICDGYGASQFFRALAELASGKSEPSVKPVWDRERLVGTITKQPLQSPMDEACAAVSPFLPTTVLMHECSKVDSESIRRLKMSMKNESFTTFESLAAYVWRSRARALKLSYDGKTMLNIIVGVRQHLLDSPLPYGYYGNAIVDANVVLTVRELNERPLSEIVKLIKETKNAAFTTDYIRNTINTLETKQVDHNMEGIGALMTLTEWKHLGFLEKVDFGWKEPINIIPAPCNMFESVDLCIFASPNNFDPSMKGGVRIFSSLPIAAMPKFREEMEALRLIKP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3583g00005 450 Pfam Transferase family 12 444 - -
Gabi3583g00005 450 Gene3D - 233 442 IPR023213 -
Gabi3583g00005 450 PANTHER ACYL TRANSFERASE 4 11 443 - -
Gabi3583g00005 450 Gene3D - 8 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3583g00005 Gabi-Chr3583 21811 23395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3583g00005 8 397 Monolignol Biosynthesis Gene Families AT5G48930 28.398 6.21e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3583g00005 K20240 - gmx:100801843 574.704