Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3574g00056 ATGTCTGAAGAGGCTGGGTCCATGTTGGCAGTTTATGATGATCCCTCAGACCAACGCTCACTATCTTTGGATGATACAAGCAGCACGGAGGAGTCCCCTGATGAAACCAGGCTCTCCTTGGAAACAGCTAATGATGCTATTCCATATATTGGTCAAAGATTTTCCACTCATGATGCTGCTTATGAATTCTATAGTGAATTTGCCAAGAGCTGTGGATTCTCAATTAGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTTACTAGACGCTACTTTGTTTGTCACCGTGCTGGCAACACTCCTGTCAAGACATCAACCGAAAGTAAACCTCAAAGAAATAGAAAATCTTCTCGATGTGGGTGTCAGGCTTACATGCGGATAAGCAAAACAACGGAATTTGGAACTCCAGAATGGCGGGTGACTGGTTTTGCCAACCACCATAATCATGAGCTTTTAGAACCAAACCAAGTTCGATTCCTTCCTGCATACAGAACTATATCAGATTCTGACAAAAACCGAATCCTTATGTTTGCCAAAACAGGGATCTCTGTTCATCAGATGATGAGGCTTATGGAGCTTGAGAAGTGTGTAGAACCTGGATATTTGCCTTTTACTGAAAAGGATGTAAGGAATTTACTCCAGTCTTTTAGGAAATTAGATCCAGAAGAAGAAAGCTTAGATTTATTAAGAATGTGCAGAAATATTAAGGAGAAAGATCCTAATTTTAAATTTGAGTACACACTTGATACAAACAATCGTTTGGAGAATATTGCCTGGTCATATGCCTCATCAATCCAATTGTATGATATCTTTGGTGATGCCGTGGTGTTTGATACAACACACCGCCTGACTGCATTTGACATGCCGATAGGAATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGCGTGCTTCTACGAGATGAAACCATGAGGTCATTTTCCTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAGGCTCCACAGACTATATTGACGGACCAAAATATATGTCTCAAAGAAGCACTGTCAACAGAAATGCCCACAACGAAACATGCTTTCTGCATATGGATGATAGTAGCAAAGTTTCCATCTTGGTTTAATGCTGTTCTAGGGGAACGTTACAATGAGTGGAAGGCTGAATTTTATAGACTTTATAATCTTGAGTCAGTTGAGGATTTTGAACTAGGCTGGAGGGAAATGGTTTGTTCTTTTGGGCTGCATTCCAATCGGCACATGGTTAACTTGTATAGCTCACGTTCACTTTGGGCATTGCCATTTTTAAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTAAGTGCACAAACTCGGCTTGCACACTTTGTAGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGTGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGAGCCCCCATGGAATCACACGCTGCCACAGTCCTCACTCCTTTTGCCTTTTCTAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCGTCTTTTTCAATTGAAGATGGTTTTCTTGTGAGGCACCACACAAAAGCTGAGGGAGGTCGGAAAGTTTATTGGGCCCCTCAGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTCTGTAGGCATTCTCTTAGAGTTCTTTCAACAGGAAATTGCTTTCAGATTCCAGATAGATATCTTCCCATTCGTTGGCGTCGAATCAGCATGCCCTCTTCTAAACTTCTTCAAAGTGCACCAAATGATCATGCTGAAAGAGTTAAGTTATTACAAAATATGGTTTCATCTCTAATTACAGAATCTGCAAAGTCTAAGGAACGACTAGATATTGCAACCGAACAAGTTTCCATCCTTCTGTCTCGCATAAGAGAGCAACCAATTCCATTACAAGGCACCAGAGATATTTCTTCCATTAATAGGAATGTTTGA 2040 0.4108 MSEEAGSMLAVYDDPSDQRSLSLDDTSSTEESPDETRLSLETANDAIPYIGQRFSTHDAAYEFYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTEFGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESLDLLRMCRNIKEKDPNFKFEYTLDTNNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPIGIWVGMNNYGMPCFFGCVLLRDETMRSFSWALKAFLGFMNGKAPQTILTDQNICLKEALSTEMPTTKHAFCIWMIVAKFPSWFNAVLGERYNEWKAEFYRLYNLESVEDFELGWREMVCSFGLHSNRHMVNLYSSRSLWALPFLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATVLTPFAFSKLQEQLVLAAHYASFSIEDGFLVRHHTKAEGGRKVYWAPQEGIISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDRYLPIRWRRISMPSSKLLQSAPNDHAERVKLLQNMVSSLITESAKSKERLDIATEQVSILLSRIREQPIPLQGTRDISSINRNV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3574g00056 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 653 IPR031052 GO:0006355
Gabi3574g00056 679 MobiDBLite consensus disorder prediction 1 37 - -
Gabi3574g00056 679 Pfam MULE transposase domain 278 370 IPR018289 -
Gabi3574g00056 679 Pfam SWIM zinc finger 560 587 IPR007527 GO:0008270
Gabi3574g00056 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Gabi3574g00056 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Gabi3574g00056 679 SMART 26again6 564 591 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3574g00056 Gabi-Chr3574 328514 332474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3574g00056 MULE 2e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3574g00056 - - gmx:100810717 1338.55