Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3574g00047 ATGGCTCTGATCCTGCATGCACAGAAAACAAACAAGAATGGTTATAAGACTCTCATTGCCGCAGAGTACACTGGTGTCCAAGTTGAATTGGCCCCTAATTTTGAGATGGGCGTTTCTAATAAAACTCCTGAATTTCTCAAGATGAATCCTATGGGAAAGGTTCCTGTATTGGAGACACCTGATGGTCCCGTCTTTGAGAGCAATGCCATGGCTCGTTACGTTGCTCGATTGAAGGGCGACAGCACTCTGTTTGGATCTTCTCCCATTGATTATGCCCATGTTGAGCAGTGGATTGATTTTTCATCGATGGAGATTGATGCTAATCTTATGAAATTGTACCTACCAAGACTTGGATTTGCCCCACACCTTCCTCCAGTTGAGGAGGCTGCAAATTCTGCATTGAAGAGAGCATTTGGGGCTTTGAGCACTCACCTTGCCTTCAATACTTACCTGGTTGGGCATTCCGTTACCCTTGCTGACATCGTAATGACATGCAATTTGTATTTCGGTTTCGCTCTGCTCCTAGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCATGGTCAACCAGCCTAGCTTCCGAAAGATATTAGGTCAGGTTAAGCAGACTGATGCTGTGCTACCTATTCAGTCTGCAAAGAAGCCTGCCCAGCCTAAGGAATCTAAACCCAAGGCTAAGGATGAACCAAAGAAAGTGGCTGTTCAAGAGCCAGAAAAGCCCAAAGAAGAAGCAGAAGAGGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCGAGTAAGATGATACTGGACGACTGGAAAAGACTCTACTCAAACACTAAGACCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCGGAGGGATATTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTTTCCTATGTGACTTTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATCTGGCTCGCAAATATGCATTTGGAAAGATGCTTGTGATTGGATCAGAGCCGCCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGGGGGCAAGAAATTCCTAAATTTGTGATTGATGAATGCTATGACATGGAGCTCTACGAATGGACAAAGGTTGACATCTCTGACGAAAATCAGAAAGAGCGTGCGAGTCAGATGATTGAAGATTTTGAACCATTTGAGGGAGAACCTCTTCTGGATGCCAAATGCTTTAAGTGA 1263 0.4481 MALILHAQKTNKNGYKTLIAAEYTGVQVELAPNFEMGVSNKTPEFLKMNPMGKVPVLETPDGPVFESNAMARYVARLKGDSTLFGSSPIDYAHVEQWIDFSSMEIDANLMKLYLPRLGFAPHLPPVEEAANSALKRAFGALSTHLAFNTYLVGHSVTLADIVMTCNLYFGFALLLVKSFTSEFPHVERYFWTMVNQPSFRKILGQVKQTDAVLPIQSAKKPAQPKESKPKAKDEPKKVAVQEPEKPKEEAEEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSYVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDISDENQKERASQMIEDFEPFEGEPLLDAKCFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3574g00047 420 SFLD Glutathione Transferase (cytosolic) 5 193 IPR040079 -
Gabi3574g00047 420 CDD GST_N_EF1Bgamma 5 77 - -
Gabi3574g00047 420 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 213 IPR010987 -
Gabi3574g00047 420 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 420 IPR044628 GO:0004364
Gabi3574g00047 420 FunFam Elongation factor 1 gamma 80 216 - -
Gabi3574g00047 420 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Gabi3574g00047 420 Pfam Elongation factor 1 gamma, conserved domain 259 367 IPR001662 GO:0003746|GO:0006414
Gabi3574g00047 420 CDD GST_C_EF1Bgamma_like 90 210 - -
Gabi3574g00047 420 MobiDBLite consensus disorder prediction 223 260 - -
Gabi3574g00047 420 Pfam Glutathione S-transferase, N-terminal domain 11 76 IPR004045 -
Gabi3574g00047 420 SUPERFAMILY GST C-terminal domain-like 73 209 IPR036282 -
Gabi3574g00047 420 MobiDBLite consensus disorder prediction 214 268 - -
Gabi3574g00047 420 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Gabi3574g00047 420 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 260 420 IPR036433 GO:0003746|GO:0006414
Gabi3574g00047 420 Gene3D - 80 216 - -
Gabi3574g00047 420 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 260 420 IPR001662 GO:0003746|GO:0006414
Gabi3574g00047 420 Gene3D Glutaredoxin 1 74 - -
Gabi3574g00047 420 FunFam Elongation factor 1B gamma 1 74 - -
Gabi3574g00047 420 FunFam Elongation factor 1-gamma 1 260 420 - -
Gabi3574g00047 420 SUPERFAMILY eEF1-gamma domain 260 420 IPR036433 GO:0003746|GO:0006414
Gabi3574g00047 420 SMART EF1G_2 259 367 IPR001662 GO:0003746|GO:0006414
Gabi3574g00047 420 SUPERFAMILY Thioredoxin-like 2 84 IPR036249 -
Gabi3574g00047 420 SFLD Main (cytGST) 5 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3574g00047 Gabi-Chr3574 277830 280436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3574g00047 1 420 Eukaryotic Initiation Factors Gene Family AT1G57720 73.460 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3574g00047 K03233 - gmx:100795680 714.146