Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3574g00038 ATGCTACTGTTGTTTGAAGGTGCAATTGCAGTCAAGCAAAAGAAAGGAAGAAAGAAAGAAAGAATGGGGGATGAGTCACCCAAGAATAAAGTGAAGTTCTTGTGCAGCCATGGCGGAAAGGTTCTTCCCCGACCCTCCGATGGCCTCCTCAAGTATGTCGGCGGCGAGACTCGTGTCATTTCCGTCCCTCGCGACATCACTTTCTCTGAACTGATGAAGAAGGTGAGCGGCATGGTTGAGGGTGAGATTGTGCTAAAGTACCAGCTAGTCCCCGAAGATCTCGATGCATTGGTGTCGGTCAAAACAGATGAAGATATGAAGCACATGATTGACGAACACGATCGACACGACAGTGGTATGCTTCGTGCTTTCCTCTTTCCTTCCAACCCGCTTTTGCTTGATAAGCAGACATCCGAACCTTATTTGTTAGAACAACGTTATATTGATGCCATCAATGGCATCGTACGTACAAGCCCAAGGGAAAGGACCCCTAATAATAATAAGCAGCATGCTTTTTCTGCTTGTTCTTCCCCAAAATCCGTTTCTCCAGATGCTCATACTCATACTCATACTCATACTGCTGCTGCTGATTCATCACCATTCCACGGCAATCGACTTGCAATGCATAAAGTCAGAAGCTCTCCGAGCCTAACAAACCTTGGCAGTAACAGCAGCAGCAGCAGCAGCAATGCCTTTCATGTCGACACACATCACCCTTCGCCTAATTATCCTTCTTCATCGAGACCACAACAGGATCCTCCTCAACTAGGGATTGGGATTGGGATTGGGATGGGAAGGCCGCCACCAATTATCACAATGGGGAAGACGGATATTATTAATAATAGGGGTTTTAACTATTATTACTCGACGACCAGACCCCTCAAGGGGTACGCATACCCAGATGATTCTGCACCTTATGGTCATTTTTTGGTTGAAAGAGTCAATAGTGTGCCTCGGAGTCCTAGAAAGTCTATATGGGAATAG 984 0.4634 MLLLFEGAIAVKQKKGRKKERMGDESPKNKVKFLCSHGGKVLPRPSDGLLKYVGGETRVISVPRDITFSELMKKVSGMVEGEIVLKYQLVPEDLDALVSVKTDEDMKHMIDEHDRHDSGMLRAFLFPSNPLLLDKQTSEPYLLEQRYIDAINGIVRTSPRERTPNNNKQHAFSACSSPKSVSPDAHTHTHTHTAAADSSPFHGNRLAMHKVRSSPSLTNLGSNSSSSSSNAFHVDTHHPSPNYPSSSRPQQDPPQLGIGIGIGMGRPPPIITMGKTDIINNRGFNYYYSTTRPLKGYAYPDDSAPYGHFLVERVNSVPRSPRKSIWE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3574g00038 327 MobiDBLite consensus disorder prediction 157 201 - -
Gabi3574g00038 327 CDD PB1_UP2 34 126 - -
Gabi3574g00038 327 SMART PB1_new 45 128 IPR000270 GO:0005515
Gabi3574g00038 327 MobiDBLite consensus disorder prediction 214 253 - -
Gabi3574g00038 327 Gene3D - 51 127 - -
Gabi3574g00038 327 PANTHER OS05G0427100 PROTEIN-RELATED 24 251 - -
Gabi3574g00038 327 Pfam PB1 domain 50 127 IPR000270 GO:0005515
Gabi3574g00038 327 SUPERFAMILY CAD & PB1 domains 47 130 - -
Gabi3574g00038 327 MobiDBLite consensus disorder prediction 158 198 - -
Gabi3574g00038 327 MobiDBLite consensus disorder prediction 214 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3574g00038 Gabi-Chr3574 226036 227735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3574g00038 16 204 MAP Kinase Kinase Kinase AT3G46920 36.634 1.56e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3574g00038 - - tpra:123910761 285.804