Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3574g00007 ATGGCAGAGTTTGATTATGAAGAGGTTGTAAAAGCAACAGATAACTTCAACCCAACAAGGCTCATAGGCAAAGGAAGCCATGGATGGGTCTACAAAGGTGTACTCTTCCAAGATAACAACAAGTTGGTAATTGCTGTGAAGAAGCCATCTCAATCTCTTCATCAAGAAGACAACTCCAAACTCGAAAACGAAATTCAAGGGTTATCCTCTTTACGTGAAAGCCCTCACGTGCTTAAACTTGTAGGGTCGACGACGAGTCATCGTCATCGTCATCATGATCATGATGATGATGAGTACAGCTCGTTCAAGCTCATAGTAATGGAGTTCATGCCCAATGGTTCACTCCATGAGTGGCTCCATGCTTCTAAAACCCCACCCACATGGCTTAAACGCTTCGAAATCGCCATGCAAATAGCTCGTGCCTTGAAATTTCTTCACCAAGGTAAGCCTTTGGTCATTCACAGAGACATCAAGTCATCCAACATCTTGATTGATTCACAATGGAACGCAAAGTTAGCAGATTTTGGACTAGCCATCGTCATAGACCGAATTGATGAGCCAGTAGTGCCGAGTCAACCCGCTGGTACAATAGGGTATTTAGACCCGAGTTACACCACACCGAGTAAACTCAGCACCAAAAATGACATGTTCAGTTTTGGGGTTGTGTTATTGGAAATCATGAGTGGTAGAAAGGCCATTGATGTGTGCAAAACCCCTGCGTCAATAGTGGAATGGGCAATTCCATTAATCGAAGATAAGCTATTTGATGAAATATGTGACAAGAGAATTGCATTGCCTCCAGCTGCATACATGGTGAACAACATCACTCATTTATTAAGAGAGGCTGCACGTTGTGTGTCACCGAACGAAGATGATCGTCCATCAGCGGAGGAAGTGATAATGGGAATGGAAAAAAATAGGTTGGTGGAACGAGTCAGGTTTCCCATTTGGACAAGCTTTTTGAAGAGCATGGTGAGGTTGAGAAAGAAGAGGAGGAAACTAGTGATGATGAGTACTGTTACAACAAAACAAGAGGGTGAGGTTGAGGTTGACAGTGATCATAAGTATAACCATATGTCAATCACCATAAAGGAGGTTTTGGCTCATGTTAGCTAG 1116 0.4301 MAEFDYEEVVKATDNFNPTRLIGKGSHGWVYKGVLFQDNNKLVIAVKKPSQSLHQEDNSKLENEIQGLSSLRESPHVLKLVGSTTSHRHRHHDHDDDEYSSFKLIVMEFMPNGSLHEWLHASKTPPTWLKRFEIAMQIARALKFLHQGKPLVIHRDIKSSNILIDSQWNAKLADFGLAIVIDRIDEPVVPSQPAGTIGYLDPSYTTPSKLSTKNDMFSFGVVLLEIMSGRKAIDVCKTPASIVEWAIPLIEDKLFDEICDKRIALPPAAYMVNNITHLLREAARCVSPNEDDRPSAEEVIMGMEKNRLVERVRFPIWTSFLKSMVRLRKKRRKLVMMSTVTTKQEGEVEVDSDHKYNHMSITIKEVLAHVS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3574g00007 371 PANTHER OS01G0253100 PROTEIN 2 304 - -
Gabi3574g00007 371 Gene3D Transferase(Phosphotransferase) domain 1 110 313 - -
Gabi3574g00007 371 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Gabi3574g00007 371 SUPERFAMILY Protein kinase-like (PK-like) 5 311 IPR011009 -
Gabi3574g00007 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Gabi3574g00007 371 SMART serkin_6 16 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3574g00007 371 Pfam Protein tyrosine and serine/threonine kinase 20 300 IPR001245 GO:0004672|GO:0006468
Gabi3574g00007 371 ProSiteProfiles Protein kinase domain profile. 16 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3574g00007 Gabi-Chr3574 37773 38888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3574g00007 4 305 Receptor kinase-like Gene Family AT3G59420 40.909 1.10e-58 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi3574g00007 PK_Tyr_Ser-Thr 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3574g00007 - - lang:109334080 407.527