Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00060 ATGTACGGATTCGAAGCTCTTACGTTCAACATCCACGGCGGTTACCTGGAGGCGATCGTCAGGGGCCACCGCGCCGGCTTACTCACCACCTCCGATTACAACAATCTCTGCCAATGCGAAACCCTCGACGACATTAAGATGCACCTTTCCGCCACCGAGTATGGCCCATACCTCCAAAACGAACCTTCTCCATTACATACCACCACACTTGTGGAGAAATGTACTCTTAAGCTGGTTGATGATTACAAGCACATGCTATGCCAAGCCACAGAACCCTTGTCAACCTTTCTAGAGTATATAACATATGGTCACATGATAGACAATGTGGTTTTGATTGTTACTGGCACCTTGCATGAGAGAGATGTTCAAGAACTACTAGAAAAATGCCATCCACTAGGCATGTTTGACAGTATTGCTACTCTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTTCTTGTTGACACTCCTCTGGCTCCGTACTTCTCTGAGTGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGCGGAATACTCTTTACAAGGCATACCTTGAAGACTTTTACAGATTTTGTCAGATAATGTCTGACCTTCTATCTTTTGAGGCTGATAGGAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTCACCAGAGATGACCGTAGAAAATTGTACTCTAATTTTGGTTTGCTTTACCCATATGGTCATGAGGAACTTGCTGTCTGTGAGGACATTGATCAGGTTCGTGCTGTTATGGAAAAATATCCCCCCTATCAATCTATTTTTGCCAAGTTATCATATGGAGAGAGCCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAGAGGCTTTGCTTGGCATTTGAGCAACAGTTTCATTATGCTGTGTTCTTTGCATATATGAGGTTAAGGGAGCAGGAGATCAGGAACCTAATGTGGATTTCAGAATGTGTTGCTCAGAATCAGAAGTCGAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1032 0.436 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTSDYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTLVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQIMSDLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00060 343 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 343 IPR016727 GO:0033179|GO:0046961|GO:1902600
Gabi3566g00060 343 Gene3D - 91 195 IPR035067 -
Gabi3566g00060 343 PIRSF V-ATP_synth_D 4 342 IPR016727 GO:0033179|GO:0046961|GO:1902600
Gabi3566g00060 343 FunFam V-type proton ATPase subunit 14 128 - -
Gabi3566g00060 343 SUPERFAMILY V-type ATP synthase subunit C 14 341 IPR036079 -
Gabi3566g00060 343 Pfam ATP synthase (C/AC39) subunit 16 336 IPR002843 GO:0046961
Gabi3566g00060 343 FunFam V-type proton ATPase subunit 202 301 - -
Gabi3566g00060 343 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 327 IPR044911 -
Gabi3566g00060 343 FunFam V-type proton ATPase subunit 91 201 - -
Gabi3566g00060 343 Gene3D - 198 301 IPR035067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00060 Gabi-Chr3566 494049 497835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00060 1 343 Primary Pumps ATPases(2) AT3G28715 93.294 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00060 K02146 - gmx:100800553 685.256