Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00057 ATGGCAATGAAGATAGAGAAAGATGTGAGCCTAAAAAAGAGCAAGACGTCCATGGCAGAAGATGAGTTACAAGCAGCACGGTGTGTCAAGAGAAGACGAAGAGAGCCTTCTGCTGCAGAAAATACTGGCCATGTTAACAACCAGCAACAACTGCAACAACAAGAAGTTAGTGAAAACTCTACAACAAACACTACAAAGAGAAGCTCAAGATTTCGCGGTGTTAGCAGACATAGATGGACGGGTCGATTTGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAAAAGAAGAAAGGGAAGCAAGGGGCTTATGATGAGGAAGAATCTGCTGCCAGAGCATATGATTTAGCGGCACTTAAGTATTGGGGAACATCAACTTTCACCAATTTCCCAATATCAGATTATGAGAAAGAGATAGATATAATGCAGACTATGACCAAAGAGGAGTACTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGCGTCTCAAAATATAGAGGTGTTGCAAGACACCACCACAATGGTAGATGGGAAGCAAGGATAGGAAGGGTTTTCGGAAACAAATACCTCTACCTTGGCACCTACAGCACGCAAGAGGAAGCTGCCCGTGCTTATGACATAGCAGCCATTGAGTATCGAGGGATTCATGCTGTAACAAACTTTGATTTGAGCACATACATAAAATGGTTAAAGCCTGCAGGAGGAAGTACCCAAGAAGCAAAGCTTGAATCACAGACAGTAGTAGATTCTCAAACAGTGGCATCCCCATCCCCATCTAACAATACTCTGATTGAAGAGTCAAAGTCTCTGGCCCTTCACAACAGTTTTTTCAGTTCATATTATCTGGATTCCCTTGAAAAGGAAGAACTCTTGGGAAACAAAACCTACCAATTCTCGAGCAATAAGTCATCTTCTCCCACTGCACTTGGCATTCTTCTACGCTCTTCGTTGTTCAGAGAACTAGTTGAGAAGAATTCAAATGTATCTGGAGATGAAACTGATGATGGGGAAGTCACAAAACATCAACAACAAAAGATAGCTAGCGATGATGAACTTGGTGGAATGTTCTACGATGGCATTGGTGATATCCCATTTGTCTGTGATCCCGATAGATACAACTTAGAATTGCAAGAAAGAGCCTTGCAATCAATATTTTGA 1173 0.4211 MAMKIEKDVSLKKSKTSMAEDELQAARCVKRRRREPSAAENTGHVNNQQQLQQQEVSENSTTNTTKRSSRFRGVSRHRWTGRFEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIDIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIKWLKPAGGSTQEAKLESQTVVDSQTVASPSPSNNTLIEESKSLALHNSFFSSYYLDSLEKEELLGNKTYQFSSNKSSSPTALGILLRSSLFRELVEKNSNVSGDETDDGEVTKHQQQKIASDDELGGMFYDGIGDIPFVCDPDRYNLELQERALQSIF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00057 390 MobiDBLite consensus disorder prediction 331 350 - -
Gabi3566g00057 390 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 ProSiteProfiles AP2/ERF domain profile. 70 133 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 MobiDBLite consensus disorder prediction 1 39 - -
Gabi3566g00057 390 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 MobiDBLite consensus disorder prediction 1 73 - -
Gabi3566g00057 390 SUPERFAMILY DNA-binding domain 69 135 IPR016177 GO:0003677
Gabi3566g00057 390 Gene3D AP2/ERF domain 168 229 IPR036955 GO:0003700|GO:0006355
Gabi3566g00057 390 Gene3D AP2/ERF domain 69 135 IPR036955 GO:0003700|GO:0006355
Gabi3566g00057 390 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 SMART rav1_2 70 139 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 MobiDBLite consensus disorder prediction 40 69 - -
Gabi3566g00057 390 CDD AP2 69 135 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 FunFam AP2-like ethylene-responsive transcription factor 168 229 - -
Gabi3566g00057 390 SUPERFAMILY DNA-binding domain 168 229 IPR016177 GO:0003677
Gabi3566g00057 390 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 41 299 - -
Gabi3566g00057 390 Pfam AP2 domain 69 125 IPR001471 GO:0003700|GO:0006355
Gabi3566g00057 390 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00057 Gabi-Chr3566 477580 479887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00057 47 268 AP2-EREBP Transcription Factor Family AT5G57390 55.649 4.39e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gabi3566g00057 AP2 1.4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00057 - - gmx:100792612 606.29