Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00051 ATGGGGTTTAAGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGAAAGTCAAAGGGAAGGATGGAGAAGGATAGTGATGAAAAGAAGATTGGATGTTGCGGTAAATTCAGTTTAATTGGGAGCTGCATACCTTCAAGATCAAAGGTTGATAACTCCATAAGTGGCACTAGTGCTCACATGGAAAAAACACCTGCACGTGAGAAAAGCAAAAAGGAAGCAAGTGCTCCTCCAGAGTCCTCTACAACTACTAGTAATGCAGAAAGTATCCCTTCCACTCCAAAAGTAAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAATGAGCTTAAGTCGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAGGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCGGGTACTGGGCTTACCGTTGCAGTCAAGACCCTCAACCACGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGTTAAATATTCTCGGTGATCTTGTCCATCAAAATCTGGTTAAATTGGTTGGTTTCTGTATTGAAGATCACCAAAGATTGTTGGTTTATGAGTTTATGCCCCGTGGAAGTTTGGAGAACCATCTCTTCAGAAGGTCCTTGCCTCTTCCGTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTAATTTTCTCCATGAAGAAGCTCAAAGGCCCATAATCTATCGCGATTTCAAGACATCTAATATTCTACTAGATGCGGAATACAATGCGAAGCTCTCTGATTTTGGTCTTGCCAAAGATGCTCCTGAAGGGGAAAAGACACACATATCAACAAGAGTTATGGGAACATATGGTTATGCAGCTCCCGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTATAGTTTCGGAGTAGTGCTACTTGAAATGCTCACTGGCAGGCGATCCATCGATAAGAATAGACCAAATGGGGAACACAATCTTGTGGAGTGGACAAGACCTCTACTTGTAGACCGGAGGAAATTCTTCCGAATAATTGATCCTCGCCTTGAAGGTCACTTCTCTGTTAAAGGGGCTCAGAAGGCTGCCCAGCTGGCTGCTCAATGCCTTTGCCGTGATCCGAAATCCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTAAAGCCTTTGCAAAACCTCAAGGATATGGCTATCTCTTCTTATCACTTCCAGGTTGTGCGTGTAGATCGTACCATGTCCATGCCAAATTCTAAAAATGGTATGCAAACACAGTTAGCATCATCTTTATCGAGGAAGGGTCAACCTGTAAGGATCTTGTCTAGTCCAAATGGTCCACATGCTTCTCCTTATCATCATTATGTCAAGTCACCAAAACCTAGTGGATGA 1428 0.4342 MGFKNNAIQAGSLDVGKSKGRMEKDSDEKKIGCCGKFSLIGSCIPSRSKVDNSISGTSAHMEKTPAREKSKKEASAPPESSTTTSNAESIPSTPKVSEELKVSSRLRKFTFNELKSATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDLVHQNLVKLVGFCIEDHQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLNFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWTRPLLVDRRKFFRIIDPRLEGHFSVKGAQKAAQLAAQCLCRDPKSRPMMSEVVQALKPLQNLKDMAISSYHFQVVRVDRTMSMPNSKNGMQTQLASSLSRKGQPVRILSSPNGPHASPYHHYVKSPKPSG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00051 475 Gene3D Phosphorylase Kinase; domain 1 101 206 - -
Gabi3566g00051 475 ProSitePatterns Protein kinases ATP-binding region signature. 127 159 IPR017441 GO:0005524
Gabi3566g00051 475 Gene3D Transferase(Phosphotransferase) domain 1 207 423 - -
Gabi3566g00051 475 SUPERFAMILY Protein kinase-like (PK-like) 95 401 IPR011009 -
Gabi3566g00051 475 Pfam Protein kinase domain 124 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 42 97 - -
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 428 451 - -
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 45 60 - -
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 76 97 - -
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 1 28 - -
Gabi3566g00051 475 FunFam Probable serine/threonine-protein kinase PBL8 207 420 - -
Gabi3566g00051 475 CDD STKc_IRAK 127 404 - -
Gabi3566g00051 475 MobiDBLite consensus disorder prediction 428 475 - -
Gabi3566g00051 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Gabi3566g00051 475 FunFam Serine/threonine-protein kinase BIK1 88 206 - -
Gabi3566g00051 475 PANTHER OS01G0588500 PROTEIN-RELATED 80 405 - -
Gabi3566g00051 475 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00051 Gabi-Chr3566 411827 417186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00051 82 417 Glycoside Hydrolase AT3G07070 50.716 3.54e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi3566g00051 Pkinase 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00051 - - gmx:100305393 829.32