Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00033 ATGGATCCCTTCAAAGGACAAGGAGGCATTCAGATGCTACTAACTGCTGAACAAGAAGCCCAACACATTGTTTCTAATGCAAGAAACTTGAGAACCCAAAGGTTGAAGCAGGCAAAAGATGAGGCTGAGAAGGAGGCAGCACAATACAGATCTCACATGGAAGATGAATATCAAAAGTCAATTTCAGAGACCACTGGGAGCTCTGGATCTAATGTAAAAAGGCTTGACCAGGAGACAGAGGTTAAGATTAAAAATTTAAAGAAATCAGGTTCAAAGGTTTCAACAGAAGTTGTTGACATGCTACTCAAGTATGTTACAAATATTAAAACATAA 333 0.3874 MDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKDEAEKEAAQYRSHMEDEYQKSISETTGSSGSNVKRLDQETEVKIKNLKKSGSKVSTEVVDMLLKYVTNIKT 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00033 110 MobiDBLite consensus disorder prediction 36 59 - -
Gabi3566g00033 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gabi3566g00033 110 FunFam V-type proton ATPase subunit G 3 110 - -
Gabi3566g00033 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 58 IPR028987 -
Gabi3566g00033 110 Coils Coil 32 59 - -
Gabi3566g00033 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gabi3566g00033 110 Gene3D - 3 110 - -
Gabi3566g00033 110 MobiDBLite consensus disorder prediction 36 73 - -
Gabi3566g00033 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00033 Gabi-Chr3566 243850 244737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00033 1 109 Primary Pumps ATPases(2) AT3G01390 55.963 7.52e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00033 K02152 - mtr:25497458 190.274