Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00014 ATGACTTCCAATACCATGGATTCCGAGTTTGCATACTTAGAATCTATTCAACAATACCTACTTGGATATGATTCAAAAAATCTGATCGATGTTTCAAAACCTAAAACCCTCAAATCTGCATCTCACACCTCATTTTCAAACCCTAATTGTGATGGCAATTTGGATAACATTCATGCAATGGTTAAGGTCGCGCGTGATGTTCACGCGCCGCCAACATGGAAGCATTATAGGGGCGTGAGGCGGAGGCCGTGGGGGAAGTTTGCGGCGGAGATCAGGGATCCGAAGAAGAACGGAGCTAGGGTTTGGCTTGGGACTTATGAAAATGAAGAGGAGGCAGCTTTGGCTTATGACAAAGCTGCTTTCAATATGCGTGGCCGAAAAGCCAAGCTGAATTTTCCTCACCTAATCGGCTGTGACGTGGCGCCGGAGCCGGCGAGAGTGGCGGCTTCCAAGCGGAGGTTATCGGAAAGTCCTCCGCCGTTGTCGTCGCCGCCATCTTCGGAGGATGGTTCAACTTCACAAGGGACAAAGAGGAGGAAGAAGAATCTAGCTGATCTACTGAATAAGTTAGCCAAGAATAGAGGAAGCCAAGCCAAGGTGGTTGAAATGGGGTTAGAGGAAAATGTTGATCAATGGTTGAACATGAATGACCTCAATGATTTTAGTCTAGTATGGTGTTCATAG 684 0.4693 MTSNTMDSEFAYLESIQQYLLGYDSKNLIDVSKPKTLKSASHTSFSNPNCDGNLDNIHAMVKVARDVHAPPTWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYENEEEAALAYDKAAFNMRGRKAKLNFPHLIGCDVAPEPARVAASKRRLSESPPPLSSPPSSEDGSTSQGTKRRKKNLADLLNKLAKNRGSQAKVVEMGLEENVDQWLNMNDLNDFSLVWCS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00014 227 PRINTS Ethylene responsive element binding protein signature 115 135 IPR001471 GO:0003700|GO:0006355
Gabi3566g00014 227 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Gabi3566g00014 227 FunFam Ethylene-responsive transcription factor 2 74 134 - -
Gabi3566g00014 227 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Gabi3566g00014 227 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Gabi3566g00014 227 SUPERFAMILY DNA-binding domain 75 134 IPR016177 GO:0003677
Gabi3566g00014 227 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Gabi3566g00014 227 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Gabi3566g00014 227 PANTHER DNA-BINDING DOMAIN 51 189 IPR044808 GO:0003700|GO:0009873
Gabi3566g00014 227 MobiDBLite consensus disorder prediction 147 179 - -
Gabi3566g00014 227 CDD AP2 74 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00014 Gabi-Chr3566 143846 144529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00014 68 212 AP2-EREBP Transcription Factor Family AT2G44840 51.020 1.60e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3566g00014 AP2 5.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00014 K09286 - gmx:100806588 232.261