Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3566g00003 ATGGAGAGGGTTGCAGAGCCAAAGGCACTTCCTAGGACCTTGCCTGTTCTTGTTGAGGTATCTAATGCACACACAACTGCAATAAGAGAAGCTGGTCAAAGACTAACTGTGCAGGATGTTTCAAGTGTGCGTGGGATGTCAGCAAGAGAAGTGAATCAGTTTTTGAAAGCACGGGATGGCCCTATGACACGTCTGGCCTCCATAAGGGAAGTGGCTCAGTTATCAAATGCGCGAATAGATTTGGTTAGAGAAGATATGGGATTCGATACCGGATCCTCTCAAGAGCCTGTCTCTCCCGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTGCCAGAACAAGAAGAACTTATGCCTGATATTGAGACATTGAAGGGCGGCAATGATTTTTCTGGAGAAACTAGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCCGAACCTGTTGATACTGATCTTATGAGAATGGTTTATGTTCCCATAGGTCAAAACAAATCTGAGGCTGAATGCTTAATGAAGAGCATGTCCCTGAAGGGTCCTTTCTTGGAAGATCTTTCAATTCGTGTTCCCACCAAGAAACCAAGCCTAGCTGTTGTTTCTCCTGCAGAAAGTCTGGTTGAAGAATCAAATGACATGGGGAGCTTACCCTCACCATTTTCAAGTGCTCGCGTATCTCAAAATACTGAGAACTCTCTCCTTTCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCCTTTCCTCCAAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTATTGGTGTTGTCAGAGCAATGAGCATTGTTTCTAGTGTTGCAAGTACATATCGGAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACTGGAATTGTGATAGTACTAAAGGTAGTGTAAGGGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGTAAGTGGTAGCAGTGGCCTCAGTGATGATAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATTCTAGGTGGAAGGCTATCCTTGCCATCCGAGCACGGGATGGACTTTTGGGCATGAGTCATTTTAGGTTACTCAAACTGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGTTGTTTTGCAATTAAAGTTATGGACAAGGCATCCCTGGCAAGCAGAAAGAAGCTGACCCGGGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCGCGCTTTTATGCTGCAGAGGTCCTGTTGGCCCTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTTGATCTTTCTCTTAGATGTGTTGTTTCCCCTACCCTTATCAGAACTTGTTATGATGGTGACCCCTCAAAACGGATTGGTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATTGAACCTTCATCAGTATGCATTCAACCTTCCTGTTTTATGCCTCGGATCTTTCTTCAGAAAAATAAGAAGTCGCGGAAGCCTAAATCTGAGCCTGGCATGCCAGCCAGCACACTTCCAGAGCTTGTTGCCGAGCCTACAACGGCTCGGTCTATGTCCTTTGTTGGCACACATGAATACCTTGCACCTGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGTTATTATATGGTAAGACACCTTTCAAAGGATCAGGAAACCGTGCTACACTGTTCAATGTGGTAGGTCAGCAGCTCAGGTTTCCTGAATCGCCAGCCACCAGTTATGCTAGTCGTGATCTGATCCGGGGCTTGCTTGTGAAGGAGCCACAGCTCCGTCTTGGGGTGAAGAGGGGTGCAACTGAGATCAAACAGCACCCTTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGTAGCACACCACCAGAAGTTCCAAGACCAGTTGAAAATGAGCTACCAGCAAAGTTTGAAGCAGTTGATACTGTTGGGGTTGGTAGCAATAGTAAGAGGATGGTAGGTAATGACTTGAAATCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2283 0.4525 MERVAEPKALPRTLPVLVEVSNAHTTAIREAGQRLTVQDVSSVRGMSAREVNQFLKARDGPMTRLASIREVAQLSNARIDLVREDMGFDTGSSQEPVSPAPTRTWKGKASLPEQEELMPDIETLKGGNDFSGETSPSSFAGASHPPEPVDTDLMRMVYVPIGQNKSEAECLMKSMSLKGPFLEDLSIRVPTKKPSLAVVSPAESLVEESNDMGSLPSPFSSARVSQNTENSLLSPDSEEKECVWDASFPPSGNVSPHSSIDSIGVVRAMSIVSSVASTYRSDAITSDGMLSLDWNCDSTKGSVRGDSLESAKTSASRVSGSSGLSDDSNWSNITGSANKPHKGNDSRWKAILAIRARDGLLGMSHFRLLKLLGCGDIGSVYLSELSATRCCFAIKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCVVSPTLIRTCYDGDPSKRIGGGAFCVQPACIEPSSVCIQPSCFMPRIFLQKNKKSRKPKSEPGMPASTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQLRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENELPAKFEAVDTVGVGSNSKRMVGNDLKSGGKYLDFEFF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3566g00003 760 FunFam serine/threonine-protein kinase D6PK-like 450 517 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 302 341 - -
Gabi3566g00003 760 SMART serkin_6 366 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3566g00003 760 CDD STKc_phototropin_like 364 719 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 207 236 - -
Gabi3566g00003 760 Gene3D Transferase(Phosphotransferase) domain 1 450 517 - -
Gabi3566g00003 760 PANTHER FLIPPASE KINASE 1-RELATED 137 723 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 88 110 - -
Gabi3566g00003 760 ProSiteProfiles Protein kinase domain profile. 366 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3566g00003 760 Gene3D Transferase(Phosphotransferase) domain 1 596 718 - -
Gabi3566g00003 760 Pfam Protein kinase domain 367 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3566g00003 760 Pfam Protein kinase domain 597 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3566g00003 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Gabi3566g00003 760 SUPERFAMILY Protein kinase-like (PK-like) 348 722 IPR011009 -
Gabi3566g00003 760 FunFam serine/threonine-protein kinase D6PK-like 595 718 - -
Gabi3566g00003 760 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 127 147 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 210 233 - -
Gabi3566g00003 760 MobiDBLite consensus disorder prediction 302 343 - -
Gabi3566g00003 760 FunFam Serine/threonine-protein kinase D6PK-like 364 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3566g00003 Gabi-Chr3566 62786 67733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3566g00003 1 760 AGC Kinase Gene Family AT2G44830 67.347 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi3566g00003 Pkinase 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3566g00003 - - gmx:100800019 1313.9