Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3565g00001 ATGGCTAGCGTTTGGAAGTCATGGTGTGTTTTGTTTACTGCACTTCATTTGTTGCACATCACGTCTTCAAATTTCTTGGTCGATAATCTACCAGGTTTTGGGAAACTTCCATTCATGTTGGAAACCGGGTACATAGGAGTGGGTGAAAGAGAAGAGGTGCAACTATTTTATTATTTTGTTGAATCTGAAAGTAGTCCCATGAATGATCCACTCCTGCTTTGGCTTGTTGGAGGTCCTGGTTGCTCTGGCCTTTCTGCTTTCTTCTATGAAAATGGACCATTAAAGTTTAATTATGACAATGTTAATGGGAGTTTTCCAGAACTTCAATTGAATCCAAACGCTTGGACGAAGGTACTCAACATGATATATATCGATGCACCTGTTGGCACCGGATTTTCTTACTCAAAAACCCAACAAGGTTATTATAGCAATGACAAGCAATGGGTGGAGCATATGTATGATTTTCTGAGAAAGTGGCTTGTGGATCACCCTAAATTCAGATCAAATCAACTTTACATAGGTGGTGGTTCATATTCAGGCATGATTGTTACTCCCCTTGTGCAAAAAGTATATGAAGATTACAAAGCAGGGAATTTACCGCTCCTAAACATTCAGTCAATTAAAGCTAGTTGTAATGGAGATTATATGAATCTTAATCCGAACAATACAAATTGCATGTCAGATTATGAAGCCTACTCAGAGTTAGTTCGTTACATAGACATGTATCAAATTATGAATCCAAGTTGTATCAAAAGGTCTCACAAAAATCAAAGAAGTCTCTTTGAAGACCTCCAAACTATCCACCAATCAACATCTTGGTGTCGGGACGATGAAGATGCTTTTCTCGTAGAATTGTGGGCAAATGATCCAAATGTTCGAAAGCATCTTAATGTTAGAGAGGGAATGAAAGGGCATTTCAAAAGATGCAAAAATATTAGTGATGCATATACAATGAATGTTCATAGTGTTGTTGAATATCTTCAAAATCTCACAAACACAAACCTTCGATGTCTAATTTATATCGGCGATCTTGACATGACGATACCTTATCTTAGTACACATTCTATAATCAAGTCACTTAATTTGAAGTTGAATAGCACTTGGCGTCCTTGGTTCAATGAGGGTGAAGTGGCAGGGTACACAGAGAGATACAAAAAGAATGAGCATCACCTAACATATGCCACTGTTAAGGGAGGGGGCCATGTAGCTCAAGAGTACAAGCCTAAAGAGGTTTATGAGATGATCCAAAAATGGTTCTCATATTATGATATCTAA 1275 0.378 MASVWKSWCVLFTALHLLHITSSNFLVDNLPGFGKLPFMLETGYIGVGEREEVQLFYYFVESESSPMNDPLLLWLVGGPGCSGLSAFFYENGPLKFNYDNVNGSFPELQLNPNAWTKVLNMIYIDAPVGTGFSYSKTQQGYYSNDKQWVEHMYDFLRKWLVDHPKFRSNQLYIGGGSYSGMIVTPLVQKVYEDYKAGNLPLLNIQSIKASCNGDYMNLNPNNTNCMSDYEAYSELVRYIDMYQIMNPSCIKRSHKNQRSLFEDLQTIHQSTSWCRDDEDAFLVELWANDPNVRKHLNVREGMKGHFKRCKNISDAYTMNVHSVVEYLQNLTNTNLRCLIYIGDLDMTIPYLSTHSIIKSLNLKLNSTWRPWFNEGEVAGYTERYKKNEHHLTYATVKGGGHVAQEYKPKEVYEMIQKWFSYYDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3565g00001 424 Gene3D alpha/beta hydrolase 206 423 IPR029058 -
Gabi3565g00001 424 Gene3D alpha/beta hydrolase 33 205 IPR029058 -
Gabi3565g00001 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 PRINTS Carboxypeptidase C serine protease (S10) family signature 391 404 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 Pfam Serine carboxypeptidase 35 207 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 408 IPR001563 GO:0004185|GO:0006508
Gabi3565g00001 424 FunFam Carboxypeptidase 274 423 - -
Gabi3565g00001 424 SUPERFAMILY alpha/beta-Hydrolases 27 422 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3565g00001 Gabi-Chr3565 6192 45726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3565g00001 282 420 Calmodulin-binding Proteins AT2G22960 43.165 2.40e-30 114