Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3560g00040 ATGAGAGGTTTAGATTACTACTTGCCAGCAATGGCTATGTTGTTCATACAGTTTATTTATGCAGGTATGAGTCTTGGCACAAGAACTGTTCTCTTACAGGGAATGAGTCCAAGGGTATTTATAGTGTACAGGCAAGTTTTTGCAACCATTGTGCTTGCTCCAGTAGCTTATTTCTCAGGGAGAATGTCTGGCTCATATTCCTTAAATTTAAGGAGTTTTTCCTTGATATTCTTGACCTCATTAATTGGCATTACATTGAATCAAAATTTATATTTTGAGGGTCTATATCTGGCCTCAGCTTCAATTGCAAGTGCAATGGCCAATCTTGTTCCAGCCCTCACATTTGTGATAGCAGCTTTTACAGGAATGGAGAGAGTGAATATTCGAAGCTTGAGAACTTTAGCCAAGATAGTAGGGACAGTAATCTGTATAAGTGGAGCAGCTTCCATTGCTCTGTTGAAGGGTCCAAAGCTACTAAATGCAGAAAACCTGCCTTCAAAATCAATCATGGGCTCAGAAGGTCAGAACTGGTTGCTGGGTATTCTATTTATCTTTGGAAGCAATTGTGCCTGGGCACTTTGGCTCATTTTGCAGGTTCCAGCATCCGCAAGCCACCCAGATCACCTATCTTTTGGATTCTGGATGTGTTTGATGGCAACATTACAATCAGCAGCAGTGACAGTATTCTTGGAGCCAGACCCAAATGCATGGAAGATTAATTCTCTACTTGAGTTTGGTTGCTCTTTATACGCAGGAGTTATGGGATCTTCAGTGTTGATCTCTCTTCAAGCATGGTGCATTTCACAGAGAGGTCCTCTCTTCTCTGCAATGTTCAATCCTCTGTTCACAGTGATTGTGACTGTATTGGCTGCCTTATTACTTCATGAGGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATCATTGGCTTGTATGTTGTGCTTTGGGGTAAAGCTGAGGAAGTTGTTAAAGCGAAAGATGAGAGAGATCCAAAATCAATGGTTAATACGACAGAGGAAGGGAAAGTATTGATAAATGAATCTTCTGAAAAAGCATATTGTAAAACTGATTTGGAAGAACCCCTTTTATCTGCTAAATCTTCTTCACATTATTAA 1122 0.4011 MRGLDYYLPAMAMLFIQFIYAGMSLGTRTVLLQGMSPRVFIVYRQVFATIVLAPVAYFSGRMSGSYSLNLRSFSLIFLTSLIGITLNQNLYFEGLYLASASIASAMANLVPALTFVIAAFTGMERVNIRSLRTLAKIVGTVICISGAASIALLKGPKLLNAENLPSKSIMGSEGQNWLLGILFIFGSNCAWALWLILQVPASASHPDHLSFGFWMCLMATLQSAAVTVFLEPDPNAWKINSLLEFGCSLYAGVMGSSVLISLQAWCISQRGPLFSAMFNPLFTVIVTVLAALLLHEEIYIGSLIGAIGVIIGLYVVLWGKAEEVVKAKDERDPKSMVNTTEEGKVLINESSEKAYCKTDLEEPLLSAKSSSHY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3560g00040 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 320 - -
Gabi3560g00040 373 PANTHER WAT1-RELATED PROTEIN 8 329 IPR030184 GO:0016020|GO:0022857
Gabi3560g00040 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Gabi3560g00040 373 Pfam EamA-like transporter family 11 149 IPR000620 GO:0016020
Gabi3560g00040 373 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3560g00040 Gabi-Chr3560 491672 494311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3560g00040 1 372 Nodulin-like Gene Family AT4G30420 54.762 1.76e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3560g00040 - - gmx:100812331 541.962