Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3560g00011 | ATGTCTTTCGGTTTCACTGACCTTTCCAATAACAACAATAACATGTCCTTTGATGATAAATGGGGAACTTCTCAACGTAAAACTGATGATCATTTTGGACTTGAAGTTCAACCTTCTTCAACTTACCCTTCTTATTCTGATTTTCCTCCTGGTTTTAGCCCAACTGAGTTATTCAATTCACCTTTGTTTCTTTCTTCTCCAAATGTTCCTGCATCTTACACCACTGATCCTTCTTCTGGCCAGTACTTCAACCGAAGAAACAGTTCAACTGAGGACCAACAATGTAACATGGTGGAAGAGAAAGATTACTCTGACCTCTCTTTCCAAATCGAAACAAAGCATGTGCCTCTCTTTCAATCTTCCACAAGCATGTTTCAAGAACAGGAGCTAGTAAAGAAACAGGACACATTGGTATTCAATGAAGCTGCAAAGCAAATTGATTTTTCATCTGAGAGGAAAGCAACCAAATCTGAATATCCATCCACTCAGCACTTATTCTCAGAAATGAGCACAACCAAACCTGAAATACAAAGTAATTATTCAGCTTCTGGGTCTGGTTACTTTAACAACACTAATGCTTCTATTAGAGAACAAAGGAGAACAGAAGATGGGTACAAATGGAGGAAATATGGAGAGAAACAAGTTAAAGGAAGTGAAAATCCACGCAGTTATTACAAGTGCACACATCCAAATTGCTCAACTAAGAAGAAAGTTGAGAGGACTTTGGATGGACATATTACTGAAATTATATACAAGGGAAGTCATAGCCATCCTAAGCCCCAGTCTACTAGAAGAACAAGTTCTCAATCAATTCTTCAATCTTCTTCATCATGCAACAACTCAGGGATTTCTGATCAATCTTTGGGAGAAGAAGACTTTGAGCATTCATCACAAACGAGTTATTCTGGAGGGGATGACAATGACCTTGGACCAGAGGCCAAAAGAAGGAAGGAAGGGAATGAAAATGATGGCTATTCCTATTCCTGTGGAATAGGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACTACAAGCGAAATTGATATACTTGACGATGGCTATAGGTGGAGAAAATATGGACAGAAAATAGTTAAAGGGAACCCAAATCCAAGGAGCTACTACAAATGCATAACCCAAGGTTGTCCAGTGAGAAAACATGTTGAGCGAGCTGCACATGATATGAAAGCTGTAATCACAACCTATGAAGGGAAACACAACCATGATGTTCCTATAGGACGAGGAAGTGCAAGTCAGAGCATGAACAAAACTTCGATGAACAGCAACACTAGTAATGTAACTATCCCCACCCCTATAAGGCCTTCAGTGGTGACTAATTGTTCTGGCTCAACAACTTTCACAAATTCACTTCATGGTACAAAGATACCAACATCTGGAAGTCAAGAACCTTTTCCACTGGACTTGCTACTGAGCCCTGGAAGCTTTGGATATTCAGCTTTGGATAGATCAATGAGTTCATATACCAATCCTGAACAATACTCAGATGCAGCAAACTTGGCTAAGGATGACTCATTCCTTCAGTCTTTTCTGTCAAAGAACTTTTAA | 1563 | 0.3941 | MSFGFTDLSNNNNNMSFDDKWGTSQRKTDDHFGLEVQPSSTYPSYSDFPPGFSPTELFNSPLFLSSPNVPASYTTDPSSGQYFNRRNSSTEDQQCNMVEEKDYSDLSFQIETKHVPLFQSSTSMFQEQELVKKQDTLVFNEAAKQIDFSSERKATKSEYPSTQHLFSEMSTTKPEIQSNYSASGSGYFNNTNASIREQRRTEDGYKWRKYGEKQVKGSENPRSYYKCTHPNCSTKKKVERTLDGHITEIIYKGSHSHPKPQSTRRTSSQSILQSSSSCNNSGISDQSLGEEDFEHSSQTSYSGGDDNDLGPEAKRRKEGNENDGYSYSCGIGTVKEPRVVVQTTSEIDILDDGYRWRKYGQKIVKGNPNPRSYYKCITQGCPVRKHVERAAHDMKAVITTYEGKHNHDVPIGRGSASQSMNKTSMNSNTSNVTIPTPIRPSVVTNCSGSTTFTNSLHGTKIPTSGSQEPFPLDLLLSPGSFGYSALDRSMSSYTNPEQYSDAANLAKDDSFLQSFLSKNF | 520 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3560g00011 | 520 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 129 | 429 | IPR044810 | GO:0003700 | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 412 | 439 | - | - | |
Gabi3560g00011 | 520 | ProSiteProfiles | WRKY domain profile. | 196 | 260 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 308 | 322 | - | - | |
Gabi3560g00011 | 520 | Pfam | WRKY DNA -binding domain | 351 | 407 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | Pfam | WRKY DNA -binding domain | 202 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | SUPERFAMILY | WRKY DNA-binding domain | 342 | 410 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | ProSiteProfiles | WRKY domain profile. | 345 | 410 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 250 | 329 | - | - | |
Gabi3560g00011 | 520 | SMART | WRKY_cls | 201 | 259 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | SMART | WRKY_cls | 350 | 409 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 407 | 439 | - | - | |
Gabi3560g00011 | 520 | SUPERFAMILY | WRKY DNA-binding domain | 197 | 260 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | FunFam | WRKY transcription factor 33 | 337 | 403 | - | - | |
Gabi3560g00011 | 520 | Gene3D | WRKY domain | 335 | 411 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | Gene3D | WRKY domain | 189 | 261 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Gabi3560g00011 | 520 | FunFam | WRKY transcription factor | 189 | 261 | - | - | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 256 | 305 | - | - | |
Gabi3560g00011 | 520 | MobiDBLite | consensus disorder prediction | 69 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3560g00011 | Gabi-Chr3560 | 138338 | 141472 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3560g00011 | 196 | 484 | WRKY Transcription Factor Family | AT2G38470 | 53.846 | 3.30e-98 | 305 |