Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3558g00067 CTCTTCTCAGCAGCAGCCCCAGGTTCAGGCCCTGCCAAGAAGTCAAATGTCCAAAGCTCAGTTGGGCCTAAATGTGATAAAGTGCAACTGGTTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTTCCGTTGCATGATTTAATGAGCTCAGTACTAGCACTGGAAGAGTCAGCACTAGACACTGATCAGGTTGAGAACCTCATAAAATTTTGTCCTACAAAAGAGGAGATGGAAGTACTCAAGGGTTATACTGGGGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTGCTGGAGTTGATGAAGGTGCCCCGGGTAGAATCCAAGCTCAGAGTTTTTTCATTCAGGATCCAGTTCCACTCTCAGGTTTCTGACCTTAAAAATAGCTTGAATGTTGTGAATGCTATTGCAGAAGAGATCAGGAATTCTTTCAAATTAAAGAGAATTATGCAAACAATACTTTCTCTCGGAAATGCTTTGAACCAAGGAACTACTAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACACGTGCACGGAACAATAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTAGCTGACAAACTACCAGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAACCAAAGGGTTAGAGAAAGTTGTACAGGAACTATCAACCTCTGAAAGTGATGGCCCTATGACAGAAACTTTCCGCAAGAATTTGAAAGGGTTCCTCTGTTTTGCTGAAGCTGAAGTCCGTTCATTGGCTTCACTATACTCTAGCGTGGGTAGGAACGTGGATGCATTGATTCTTTATTTTGGTGAAGATCCATCTCGCTGCACATTTAAGCAAGTTGTCACAACTTTGGTCGACTTTACTAGAATGTTCAAAAAAGCCCATGAAGAAAATTGCAAGCAACTAGAGATTGAAATGAAGAAAACAGAAAAAGATAAAAAGAAATGTGAATCAGAAAGGATATTGCCTACAGCAATCCGGACCGGCAATGTCAAATAA 1098 0.4126 LFSAAAPGSGPAKKSNVQSSVGPKCDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMEVLKGYTGEKEKLGRCEQFLLELMKVPRVESKLRVFSFRIQFHSQVSDLKNSLNVVNAIAEEIRNSFKLKRIMQTILSLGNALNQGTTRGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAITKGLEKVVQELSTSESDGPMTETFRKNLKGFLCFAEAEVRSLASLYSSVGRNVDALILYFGEDPSRCTFKQVVTTLVDFTRMFKKAHEENCKQLEIEMKKTEKDKKKCESERILPTAIRTGNVK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3558g00067 365 SUPERFAMILY Formin homology 2 domain (FH2 domain) 26 352 - -
Gabi3558g00067 365 PANTHER FORMIN-J 1 350 - -
Gabi3558g00067 365 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3558g00067 365 Pfam Formin Homology 2 Domain 2 325 IPR015425 -
Gabi3558g00067 365 Coils Coil 325 352 - -
Gabi3558g00067 365 Gene3D Formin, FH2 domain 1 354 IPR042201 -
Gabi3558g00067 365 SMART it6_source 1 365 IPR015425 -
Gabi3558g00067 365 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 350 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3558g00067 Gabi-Chr3558 562734 568357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3558g00067 1 348 Protein tyrosine phosphatase (PTP) family AT5G58160 74.425 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3558g00067 - - cam:101513310 629.017