Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3558g00041 ATGGAAAGTTCGAAGAACTATAGAGTGGAAAAAAGAGGGCACGAGCTAGTTGAGCAAGGTGATGACGCAGATCATCTAATCCAGCCCAAGAAGCCAAAATTGCCAGGTTTAGCCAGTGTAATCGTGGAAGCTTTGAAGGTGGATAGTCTGCAAAGGCTTAGCTCATCTTTGGAACCACTTCTCAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTAGCTAAAGCGGGCCATGCTAAACTGGCTGAAAGATCACAACCAAAACTAGAAGGACCAAGGTCAAAGAATCTGCAGCTTTGTGTCAGAACAAGAATGCCACCTCACTTGTTCACAGGTGGAAAGGTTGAGGGAGAGCAAGGAGCATCTATCCATGTTGTCTTGCTAGACCCAAACACTGGCAGTGTAGTCCAAATTGGACCAGAATCAGTTGCTAAATTGAATGTTGTGGTACTTGAAGGAAACTTTAATGAGGAAGCTGATGATGATTGGACAAAGGAGCACTTTGAGAGCCATGAAGTAAAGGAGCGTGAAGGGAAAAAGCCACTTCTAACTGGAGATTTGCAGGTTATTCTAAAGGAAGGGGTGGGAACCTTAGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTAAGGTGGCTTCTGGATATTGTGATGGGATTCGTATTCGTGAGGGAAAGACTGAAGCTTTTGCTGTTAAAGATCATAGAGGAGAATTATATAAGAAACACTATCCACCTGCTTTGCGTGACGAAGTTTGGAGATTGGATCGAATAGCAAAGGATGGGGCAATGCACAAAAAATTGATTCTAGCAAAAATAATAACTGTAGAAGATTTCCTTCGTCTACTTGTCAGGGACCCACAGAAGTTAAGAAGTATACTTGGTAGTGGAATGTCCAACAGGATGTGGGATAATACTGTAGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTTTTCGTTTACTACACTGATGAGACTAATAGCACTGGCATTGTGTTCAGTCATATATACGAACTGAGAGGCCTCATTGCTGATGGACACTTCTTCTCTTTGGAATCACTTACACCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAGAAAGCATATGAAAATTGGAACCAAGTTGTAGAATATGATGGAAAAGTTTTGAGTTCTGTTCCTAATGCCAAAACAGGATCAAGATCTGTAGCCACACATCATAACTACGTTGTAGAGCAGCAGCATACTTCAACAAAGAATAGGATGCCATATGTCACAAACCAACATTTACAAATAACAAATAACCATTCAATGAATACTGACTTGACTGATTATCCATTTGGTAGGCCAGGCAGTGAGATGGTAGGGACAATGTTAAATAACTCTCAAGTAGCATTGTCAAGCAGCATTAATTACAAACCAGGTGAAAAATCTGCAGTTGAAGGTACTTATTTTCTAGGAGATTGGTCTAGGCAGAGAAATGGGCAAGGATTGGAAGACATTGTTGCCAAAGAACTCCATCTTAGGAGTTCAGAGATGTTGGAGAGTGAGGATATGCAAAGCTTACTTAAGACAATTAATGCAGGAGTCAGCATGGAAACTAATTTTGGTCATTCCAATGAGGGTTGTTACTCCTACAATGTGCAATATGAGCCTCATGTGTATCATACATTCAGTCAGGATCTTGGAAAGTCTTCAGGGAAAGCAGTTGTTGGGTGGCTTAAGCTTAAAGCTGCTTTAAGGTGGGGCATATTTATCAGAAAAAAAGCTGCTGAAAGGAGAGCACGGCTTACTGAGATGAATTAA 1818 0.4131 MESSKNYRVEKRGHELVEQGDDADHLIQPKKPKLPGLASVIVEALKVDSLQRLSSSLEPLLRKIVSEEVERALAKAGHAKLAERSQPKLEGPRSKNLQLCVRTRMPPHLFTGGKVEGEQGASIHVVLLDPNTGSVVQIGPESVAKLNVVVLEGNFNEEADDDWTKEHFESHEVKEREGKKPLLTGDLQVILKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVASGYCDGIRIREGKTEAFAVKDHRGELYKKHYPPALRDEVWRLDRIAKDGAMHKKLILAKIITVEDFLRLLVRDPQKLRSILGSGMSNRMWDNTVEHAKTCVLGGKLFVYYTDETNSTGIVFSHIYELRGLIADGHFFSLESLTPNQKMSVDSLVKKAYENWNQVVEYDGKVLSSVPNAKTGSRSVATHHNYVVEQQHTSTKNRMPYVTNQHLQITNNHSMNTDLTDYPFGRPGSEMVGTMLNNSQVALSSSINYKPGEKSAVEGTYFLGDWSRQRNGQGLEDIVAKELHLRSSEMLESEDMQSLLKTINAGVSMETNFGHSNEGCYSYNVQYEPHVYHTFSQDLGKSSGKAVVGWLKLKAALRWGIFIRKKAAERRARLTEMN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3558g00041 605 PANTHER OS02G0177800 PROTEIN 11 523 IPR012416 GO:0005516
Gabi3558g00041 605 MobiDBLite consensus disorder prediction 1 29 - -
Gabi3558g00041 605 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Gabi3558g00041 605 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Gabi3558g00041 605 Pfam Calmodulin binding protein central domain 257 322 IPR046830 -
Gabi3558g00041 605 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3558g00041 Gabi-Chr3558 410443 414530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3558g00041 1 605 Calmodulin-binding Proteins AT2G24300 60.227 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3558g00041 - - gmx:100775528 991.49