Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3558g00033 ATGTTTTCCAGAATTGCACTTGTCCTAACCTTTCAAGTTTTCCTTTGCACTCTGAACTTCCAACCCTCAGAAGCTCAATCATGGTTCAAAATTGGTTACTGGTACTATGGCAGAGAATCTCCCACATCAGATATAAACTCTGCCCTCTATACTCACCTGATATGCGCTTTTGCTGATGTGAACAATTCCTCCTTTGAGCTTTCTGTCCCTTCATCAAATGAGCAACAGTTTTCTACTTTCACTAGCACTCTCAAACTGAAGAACCCATCCATCACTACACTTCTCTCCATTGGTGGTGACCAAAACACTATTTCCATCCAATCCATGATTGCCAATGCTTCTTCAAGGAAACCCTTCATTCAATCTTCAATAAGAATAGCTAGGCTTTATGGATTTCAGGGGCTGGACTTGTTCTGGTATTCCTTTGAGACAGGTTCTGATGTTGACAATTTGGGACAACTTTTCCAAGAATGGAGAGCTGCTGCAAAATCTGAAGCAGAAACAAACTCTACACTTCAAGAATTGATCTTGACTGCATCTGTTCAAGCTTCACCTGATTTGGATTTTGGGTCCTTCCCAGTTGAGTCAATCAAAAGTAACTTGAATTGGATACATGTTAATGCATATAATTATCACACACCCTTGGGGCAAAACTTCACTGGTGCACCTTCAGCTTTATATGACCCTGCAAGTGATATCAACACTGACTATTATATCAAGGCATGGATTGGGAAGGGGATATCATCTAGCAAGTTGATTCTGGGTTTGCCTTTCTATGGATATGCTTGGAAACTACAAAAACCCAATAACAACTCAATAGGAGCACCAGCAACAGGTCCAGCATTTGATGATGATGGATCTAAAAGCTATGAGGACATAAAAAATGATATTCAGAAAAATGGGGCTGCAGTAATGTATAATGACACTTACGTAACAAACTACTGTTCATTTGGATCAACTTGGATTGGCTTTGACGACGTTGAGGTTGTCCGAAAGAAGGTATCATATGCCAGGGAAAAGAAGCTACTTGGTTACTATGTATGGCAAGTTTCCCATGATGACGACAAATGGACACTTACAACCGCAGCAGCTGAACAGGTTGATGAAGACAAAAAGCACGGGTGGAAATTATTAGTGATCATTTTGAGTATAACTAGTATAGTTATTCTCATGTTTGGTGTCATTATCTATTGCCAAAGGAAGAGAATATTCAAATCAACCGGGACAGTTAATGCTCGGTTTACAGTGAATAAAGAAGTTGTAGGACCTTTTAATGGGGATGCTCCTGATTTACAGGTTTACAGATTTTCTGACATTGAAGCAGCTACAGATAAATTTTCATATGAAAATAAGCTCGGACAGGGTGGTTATGGTCCTGTTTACAAGGGCATCCTAACTGATGGTCAGGAAATAGCCGTAAAAAAATTATCAAAAGCTTCTACACAAGGATTCGAGGAATTCAAAAATGAGGTAACACTTACTGCAAGGTTACAACATGTGAATCTTGTACAGTTGTTGGGTTTCTGCGTTGAAAGAGAAGAGCAGATGCTGGTGTACGAGTACATGGAAAATAAAAGCCTGGACTTCTACCTCTTTGACCCTGTTAGACGACATATGTTAGATTGGAATAAGCGTGTTGGCATCATTGAAGGAGTTACGCAAGGTCTTCTTTATCTTCAAGAATATTCAAGATTCACCATAATTCATCGAGACATAAAAGCTAGCAATATTTTATTAGACTCTGAGATGAAGCCAAAGATATCAGACTTTGGAATGGCAAGAATATTCACTAAAGATGAACAAGAGGCAAACACTAGCAAAATTGTGGGAACATATGGTTATATTCCTCCTGAATACGTTAAAAAAGGTGTGTACTCCACTAAATCTGATGTCTACAGTTTTGGAGTCCTACTTTTACAAATTATAAGTGGCAAGAAGACATCTGGCTTTTATGGAGAGAACGAAGATTTAAAGTTCTTGGAATATGCTTATGAGTTATGGAAAGAAGGAAAGGGTATGGAGTTCGTGGATCTTGCACTTGATGATACATCTTCACCGTGCAAACTAATGAGATGCATGCAAATTGCTTTGCTATGCGTCCAAGAACATGCAAATGATAGACCTTCCATACTGGAAGTTTATTCAATGTTGAGAAACGATAATAACACACTAGCCATCCCCAAAAAGCCTGCATTTGCAAAAGTCAGAGGTGAGGAAGAAGTAAATGAGTGTCAACCCCTACAAATTATTTCAATCAATGATGCAACCGTCACTCAAATGGTGGGCAGATAG 2292 0.3905 MFSRIALVLTFQVFLCTLNFQPSEAQSWFKIGYWYYGRESPTSDINSALYTHLICAFADVNNSSFELSVPSSNEQQFSTFTSTLKLKNPSITTLLSIGGDQNTISIQSMIANASSRKPFIQSSIRIARLYGFQGLDLFWYSFETGSDVDNLGQLFQEWRAAAKSEAETNSTLQELILTASVQASPDLDFGSFPVESIKSNLNWIHVNAYNYHTPLGQNFTGAPSALYDPASDINTDYYIKAWIGKGISSSKLILGLPFYGYAWKLQKPNNNSIGAPATGPAFDDDGSKSYEDIKNDIQKNGAAVMYNDTYVTNYCSFGSTWIGFDDVEVVRKKVSYAREKKLLGYYVWQVSHDDDKWTLTTAAAEQVDEDKKHGWKLLVIILSITSIVILMFGVIIYCQRKRIFKSTGTVNARFTVNKEVVGPFNGDAPDLQVYRFSDIEAATDKFSYENKLGQGGYGPVYKGILTDGQEIAVKKLSKASTQGFEEFKNEVTLTARLQHVNLVQLLGFCVEREEQMLVYEYMENKSLDFYLFDPVRRHMLDWNKRVGIIEGVTQGLLYLQEYSRFTIIHRDIKASNILLDSEMKPKISDFGMARIFTKDEQEANTSKIVGTYGYIPPEYVKKGVYSTKSDVYSFGVLLLQIISGKKTSGFYGENEDLKFLEYAYELWKEGKGMEFVDLALDDTSSPCKLMRCMQIALLCVQEHANDRPSILEVYSMLRNDNNTLAIPKKPAFAKVRGEEEVNECQPLQIISINDATVTQMVGR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3558g00033 763 Gene3D Phosphorylase Kinase; domain 1 413 521 - -
Gabi3558g00033 763 Gene3D - 258 324 IPR029070 -
Gabi3558g00033 763 CDD GH18_plant_chitinase_class_V 26 359 - -
Gabi3558g00033 763 SMART 2g34 29 353 IPR011583 GO:0008061
Gabi3558g00033 763 SUPERFAMILY Protein kinase-like (PK-like) 430 737 IPR011009 -
Gabi3558g00033 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 414 521 - -
Gabi3558g00033 763 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 370 IPR001223 GO:0005975
Gabi3558g00033 763 FunFam Chitotriosidase-1 258 324 - -
Gabi3558g00033 763 FunFam Uncharacterized protein 522 728 - -
Gabi3558g00033 763 Gene3D Transferase(Phosphotransferase) domain 1 522 731 - -
Gabi3558g00033 763 SUPERFAMILY (Trans)glycosidases 31 366 IPR017853 -
Gabi3558g00033 763 ProSiteProfiles Protein kinase domain profile. 446 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3558g00033 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Gabi3558g00033 763 Gene3D Glycosidases 43 354 - -
Gabi3558g00033 763 Pfam Glycosyl hydrolases family 18 31 353 IPR001223 GO:0005975
Gabi3558g00033 763 Pfam Protein tyrosine and serine/threonine kinase 448 716 IPR001245 GO:0004672|GO:0006468
Gabi3558g00033 763 SMART serkin_6 446 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3558g00033 763 SUPERFAMILY Chitinase insertion domain 259 324 IPR029070 -
Gabi3558g00033 763 CDD STKc_IRAK 452 717 - -
Gabi3558g00033 763 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3558g00033 Gabi-Chr3558 323677 328830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3558g00033 361 732 Receptor kinase-like Gene Family AT4G05200 48.533 1.78e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3558g00033 Glyco_hydro_18 8.4e-64 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3558g00033 - - vun:114175226 1098.19