Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3558g00009 ATGCCTAAAAAGGGACTGAGAAACTTGTTGTTCTTCAAACACTCACCATTACCCCCTTCCTCTACTCGCAGAGTCACCTTCTCCGATTCATTAATGGATGAAAACATTGAAACCGCTCGCTCCCTCATAACCAAATGGGATCCTATTCCAACTTCCAACGGCAAAACCACCACTCTTTTCAGCAACACTCGAGAGGAAGCCAAACAGTACATTAACGCCGTTAAGAGGCTGCAATCCGCTATGCAGTACCTCGTCGCACAGGATTCCTCCTCCGAGAAGCTCTTGCAAGCACAGTTATTATTGCAAGTCGCCATGAAGAGGCTCGAGTTGGAGTTCTATCGGATATTATCCGAAAACAGAGACCGATTGGAACCTGAATCTGTCTCCTCCCGCTCCTCCACCGATCGCCGGAGCAGCGTCTCCGATTACGACGATGAATTCTCCGACGACGAGTTCCGTCTCGCCGCCGGCAACAACTCTGTATCAATGGTTGCAATGGCGGATTTGAAAGCCATTGCAGAGTGTGTGATTTCAGCAGGATATAGCGAAGAGTGCGTCAAGATTTACATCATCGTGAGAAAGTCGATTGTTGATGAGGCACTGTACCATCTCAGAGTTGAGAGGCTCAGCTTCTCTCAGGTTCAGAAGATGGACTCGGAGGTGCTTGAATTGAAGATTAAGAGCTGGTTGAATGCTATCAAGGTCGCCGTCGGAACTCTGTTTCACGGTGAGAGAGTTCTCTGCGATCACGTTTTTGGTTCCGCGGAGAATAAGATCGCCGAGTCCTGTTTCGCCGAGATTTGCAGAGATGGCGCAACGTACCTGTTTGGATTCCCGGAAAACGTGGCAAAGTGCAAGAAAACGCCAGAGAAAATGTTCAGGACACTCGACATGTACGAAGCGATATCTGACAATTTGCAACAAATTGAATCCATCTTCTCGTTTGAATCAACGTCCACGATCAGATCGCAAGCCGTCAATTCACAGGTGAGGCTCGGCGAGGCCGTTAGGGCGATGCTATCGGACTTCGAATCGGCGATTCAGAAGGAATCCTCGAAGATTCCAGTGCCAGGCGGTGGGGTCCACCCGCTCACGCGCTACGTCATGAACTACATCGCCTTCCTCGCCGATTACAGCGGCGTTCTCGCCGGGTTAATCGCCGATTGGCCGCGAACTCCGTTGCCGGAGTCTTACTACCGCAGTCCGAATCGCGAGGAAGATAAAACGTCGTCTGAGATAGCGGAACAGCTCGCGTGGCTGATACTGGTGGTGCTCTGCAAGCTGGACGGCAAAGCTGGGCTTTACAACGACATTGCACTCTCTTACCTGTTCCTCGCGAATAACATGCAATACGTCGTCGTAAAGGTCCGAAAATCGAACCTAGGGTTCCTTTTCGGCGAGGATTGGTTTATGAAGCACGAGTCCAAGGTGAAGGAGTATGTCTCCAAGTACGAGCGCGTGGGGTGGAACAAGGTGCTGGAGTCGCTGCCGGGGAATCCGACGGCTGAGATGCCGGCGGAGCAAGTCAGGGCCATATTCGAGAGTTTCAACGCCGCATTCGATGAAGCGTGCAGGGCCCAGTCCTCGTGGGTCGTATCCGACCCGAAATTACGAGACAAAATCAAAGTTTCGATAGCTTCGAAGCTGGTGCCTAGGTACGTGGAATTCTACGAGAAGTTTCGGGTCGGGTCGGAGTCGGTTATAAGATATTCACCCGATGATTTGGGGAATAATCTTTCGGAGCTTTTGTATGGGATGGAACAATCGGATAGTGTTTCGTCGCATTGTCGTTCTCCTATTCATCGTTTGAAACGCCCGTGA 1821 0.5091 MPKKGLRNLLFFKHSPLPPSSTRRVTFSDSLMDENIETARSLITKWDPIPTSNGKTTTLFSNTREEAKQYINAVKRLQSAMQYLVAQDSSSEKLLQAQLLLQVAMKRLELEFYRILSENRDRLEPESVSSRSSTDRRSSVSDYDDEFSDDEFRLAAGNNSVSMVAMADLKAIAECVISAGYSEECVKIYIIVRKSIVDEALYHLRVERLSFSQVQKMDSEVLELKIKSWLNAIKVAVGTLFHGERVLCDHVFGSAENKIAESCFAEICRDGATYLFGFPENVAKCKKTPEKMFRTLDMYEAISDNLQQIESIFSFESTSTIRSQAVNSQVRLGEAVRAMLSDFESAIQKESSKIPVPGGGVHPLTRYVMNYIAFLADYSGVLAGLIADWPRTPLPESYYRSPNREEDKTSSEIAEQLAWLILVVLCKLDGKAGLYNDIALSYLFLANNMQYVVVKVRKSNLGFLFGEDWFMKHESKVKEYVSKYERVGWNKVLESLPGNPTAEMPAEQVRAIFESFNAAFDEACRAQSSWVVSDPKLRDKIKVSIASKLVPRYVEFYEKFRVGSESVIRYSPDDLGNNLSELLYGMEQSDSVSSHCRSPIHRLKRP 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3558g00009 606 MobiDBLite consensus disorder prediction 124 143 - -
Gabi3558g00009 606 MobiDBLite consensus disorder prediction 124 144 - -
Gabi3558g00009 606 Gene3D Exocyst complex component Exo70 50 591 - -
Gabi3558g00009 606 SUPERFAMILY Cullin repeat-like 56 582 IPR016159 -
Gabi3558g00009 606 FunFam Exocyst subunit Exo70 family protein 53 591 - -
Gabi3558g00009 606 Pfam Exo70 exocyst complex subunit 227 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi3558g00009 606 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 581 IPR004140 GO:0000145|GO:0006887
Gabi3558g00009 606 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3558g00009 Gabi-Chr3558 92369 94189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3558g00009 11 585 EXO70 exocyst subunit family AT5G59730 49.833 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3558g00009 K07195 - gmx:100801773 801.201