Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3558g00007 ATGGCGAGAATCAAGGTGTACGAGCTCAGGAACAAAACGAAAGCAGAGCTTCTGAACCAATTGAAGGATCTCAAAGCAGAACTTGCTCTCCTTCGCGTCGCTAAGGTCACTGGCGGAGCCCCTAACAAGCTTTCCAAAATGTGCTCTCTCTCTCTCTCTCTCTATAATTTGAGATTAAATCCAAAAGTGGTTCGGCTTTCGATAGCGCAGGTGCTGACGGTGATTTCCCAGAAGCAAAAAGCAGCGTTGAGGGAGGCTTATAAGAAGAAGAAGTACCTTCCTTTGGATCTGCGTCCAAAGAAGACCAGAGCTATCAGAAGGCGCCTCACCAAGCACCAGGCATCCTTGAAGACAGAGCGTGAGAAGAAGAGGGAATTGTACTTTCCAGTGAGAAAATATGCAGTTAAGGTGTAA 414 0.4686 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKMCSLSLSLYNLRLNPKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKRELYFPVRKYAVKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3558g00007 137 Hamap 50S ribosomal protein L29 [rpmC]. 4 78 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi3558g00007 137 Pfam Ribosomal L29 protein 8 47 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi3558g00007 137 Gene3D - 1 91 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi3558g00007 137 Gene3D - 92 137 - -
Gabi3558g00007 137 PANTHER 60S RIBOSOMAL PROTEIN L35 1 137 IPR045059 GO:0000463|GO:0022625
Gabi3558g00007 137 SUPERFAMILY Ribosomal protein L29 (L29p) 4 79 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gabi3558g00007 137 NCBIfam 50S ribosomal protein L29 8 46 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gabi3558g00007 137 Coils Coil 7 34 - -
Gabi3558g00007 137 FunFam 60S ribosomal protein L35 92 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3558g00007 Gabi-Chr3558 62988 64390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3558g00007 1 137 Cytoplasmic Ribosomal Protein Gene Family AT5G02610 74.658 1.06e-68 202