Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00026 ATGTATACAATACCCCACACATCACAAGCACTGATGCCGAGTGTTAACCCAGACCCATCTGACAAAGATTCTGAGCCATTTGTTGAAACTGATCCAACTGGCCGCTATGGTCGATACAGTGAATTACTTGGATCTGGTGCTGTGAAAAAAGTGTACCGTGCATTTGATCAAGAGGAAGGAATAGAGGTGGCTTGGAATCAAGTTAAGCTCAGGAATTTCTCTGATGACCCTGCAATGGTGGATAGGCTTTACTCTGAAGTGAGGTTACTCAGAAGCTTGACCAACAAAAACATCATTTCCCTTTACAAGGTGTGGAGGGATGGACAACGTAACACTCTTAATTTCATCACTGAGGTCTGTACCAGTGGGAATTTGAGGGAGTACCGGAAAAAGCATAGGCATGTTTCCTTAAAGGCCCTGAAGAAGTGGTCTAAGCAGATTTTGAAAGGGCTGAATTATATGCATATGCATGATCCCTGTATCATCCATAGAGATCTCAATTGCAGTAATGTGTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGGAAAGAACCATTGTGCACACTCGATTCTTGGTACACCAGAATTTATGGCTCCAGAATTATATGAGGAAGACTACACAGAAATTGTGGACATATATTCATTTGGGATGTGTGTGTTAGAGATGGTGACACTGGAGATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATACAGGAAGGTGTCTTCTGGAGTGAGACCTTTGGCCTTGAACAAGGTCAAAGATCAAGAGGTGAAGGCCTTCATTGAGAAGTGTCTTGCTCAGCCAAGGGCTAGACCTTCTGCTGCTGATCTTCTCAAAGATCCTTTCTTTGATGAGATTGTTGATGATGATGACGAAAATGATGACTGTGCTTGTTGCTCATAG 939 0.4281 MYTIPHTSQALMPSVNPDPSDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIISLYKVWRDGQRNTLNFITEVCTSGNLREYRKKHRHVSLKALKKWSKQILKGLNYMHMHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHSILGTPEFMAPELYEEDYTEIVDIYSFGMCVLEMVTLEIPYSECDNVAKIYRKVSSGVRPLALNKVKDQEVKAFIEKCLAQPRARPSAADLLKDPFFDEIVDDDDENDDCACCS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00026 312 CDD STKc_WNK 35 295 - -
Gabi3551g00026 312 MobiDBLite consensus disorder prediction 1 15 - -
Gabi3551g00026 312 MobiDBLite consensus disorder prediction 1 33 - -
Gabi3551g00026 312 Gene3D Transferase(Phosphotransferase) domain 1 120 301 - -
Gabi3551g00026 312 ProSiteProfiles Protein kinase domain profile. 37 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3551g00026 312 FunFam probable serine/threonine-protein kinase WNK9 120 301 - -
Gabi3551g00026 312 FunFam Probable serine/threonine-protein kinase WNK1 21 118 - -
Gabi3551g00026 312 SUPERFAMILY Protein kinase-like (PK-like) 32 296 IPR011009 -
Gabi3551g00026 312 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 20 298 - -
Gabi3551g00026 312 Pfam Protein kinase domain 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3551g00026 312 Gene3D Phosphorylase Kinase; domain 1 21 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3551g00026 Gabi-Chr3551 204509 206283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3551g00026 16 299 MAP Kinase Kinase Kinase AT5G55560 83.451 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3551g00026 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00026 K08867 - gmx:100816060 535.798