Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00025 ATGATGCCGAGTGTTAACCCAGACCCATCTGACAAAGATTCTGAGCCATTTGTTGAAACTGATCCAACTGGCCGCTATGGTCGATACAGTGAATTACTTGGATCTGGTGCTGTGAAAAAAGTGTACCGTGCATTTGATCAAGAGGAAGGAATAGAGGTGGCTTGGAATCAAGTTAAGCTCAGGAATTTCTCTGATGACCCTGCAATGGTGGATAGGCTTTACTCTGAAGTGAGGTTACTCAGAAGCTTGACCAACAAAAACATCATTTCCCTTTACAAGGTGTGGAGGGATGGACAACGTAACACTCTTAATTTCATCACTGAGGTCTGTACCAGTGGGAATTTGAGGGAGTACCGGAAAAAGCATAGGCATGTTTCCTTAAAGGCCCTGAAGAAGTGGTCTAAGCAGATTTTGAAAGGGCTGAATTATATGCATATGCATGATCCCTGTATCATCCATAGAGATCTCAATTGCAGTAATGTGTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGGAAAGAACCATTGTGCACACTCGATTCTTGGTACACCAGAATTTATGGCTCCAGAATTATATGAGGAAGACTACACAGAAATTGTGGACATATATTCATTTGGGATGTGTGTGTTAGAGATGGTGACACTGGAGATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATACAGGAAGGTGTCTTCTGGAGTGAGACCTTTGGCCTTGAACAAGGTCAAAGATCAAGAGGTGAAGGCCTTCATTGAGAAGTGTCTTGCTCAGCCAAGGGCTAGACCTTCTGCTGCTGATCTTCTCAAAGATCCTTTCTTTGATGAGATTGTTGATGATGATGACGAAAATGATGACTGTGCTTGTTGCTCATAG 909 0.4279 MMPSVNPDPSDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIISLYKVWRDGQRNTLNFITEVCTSGNLREYRKKHRHVSLKALKKWSKQILKGLNYMHMHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHSILGTPEFMAPELYEEDYTEIVDIYSFGMCVLEMVTLEIPYSECDNVAKIYRKVSSGVRPLALNKVKDQEVKAFIEKCLAQPRARPSAADLLKDPFFDEIVDDDDENDDCACCS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00025 302 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Gabi3551g00025 302 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gabi3551g00025 302 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3551g00025 302 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Gabi3551g00025 302 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3551g00025 302 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3551g00025 302 CDD STKc_WNK 25 285 - -
Gabi3551g00025 302 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Gabi3551g00025 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 288 - -
Gabi3551g00025 302 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3551g00025 Gabi-Chr3551 204327 206283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3551g00025 6 289 MAP Kinase Kinase Kinase AT5G55560 83.451 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3551g00025 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00025 K08867 - gmx:100816060 536.954