Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00023 ATGGACGCTACTGCCACCAACTTCGGCAAACCCTACGCGGGTTCGGAGCTCCGGCTCGACGGGGCATCCGATGATCCGAATCGAGCCGGGTCGGGTCAGAATTCGACAGCAAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATTACGATACCTCCGGGAATGAGTCCGACGTCGTTTCTGGAATCCCCGGTTCTTCTTTCCAACATGAAGGTGGAGCCTTCACCTACTACTGGGTCCCTTCCTAAGCTTCATCAAACTGCGGCTTCTACTGTGTCTGCTTCATTTCCTGTAACCACTGCATGCTTCAATACCAATATTGTTGATGACAGAAAATCAAGCTTCTTTCAGTTTAAACCGCACAATAGATCAAATATGGTTCCTGCAGACTTCAACAACCTTGTAAGTGAACAATCTACTCAAGTAAAAGGTCCAGGAAAAGCTGAATCGTTTACCCCCTCACCATTAGTCGAAAGTGATAGAGCAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTTCAAATGGTTAGTTCTGGGGCTTGTGCTCCTGTTGATGTTGATGTGGATGAATTTAATCACAAAGGCAACACAGCTACTGGGCTTCAAACATCACATGTTGAGGTTAGAGGCAATGGTCTTTCAGTTGCAGCTGAGAGAACGTCTGATGACGGATACAATTGGCGAAAATATGGGCAGAAACATGTTAAAGGAAGTGAATTTCCGCGCAGCTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCCCCTGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGTTGCCGATATTCTGCTGGTACCATTATGTCTTTGCAAGGAGACAGATCTGATAAGGCTTCTGCTTTGGCTGGTCGAGATGACAAAGCATCCAATATGTATTGTCAGGTGTCTCATGAAGCTGACCCCAACAATACTACAGAGCTATCACCTGTAGCAACAAATGGTGATAGTCTAGAGGGTGCTGGGTTTGTGTCAAACAGGACTAATGATGAGGTTGATGATGAAGATCTCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGCTGATATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGGTACCGCTGGCGTAAGTATGGGCAGAAGGTAGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCTGTTAGAAAGCACGTGGAGAGGGCATCTCATGATCCGAAAGCAGTAATAACCACATACGAGGGTAAGCACAATCATGATGTACCGGCTGCAAGGAGTAGTAGCCATGACATGGCAGGACCATCAACTGCAGGTGGACAGACTAGAATTAAGTTAGAAGAAAGTGATACTATTAGCCTTGACCTCGGAATGGGCATGACCTCAGCTTCTGAAAATAGATCAAACGGGCAAGGCAAAATGCTGCTCTCTGAATTTGGGAATGGTCAAAATCACACCAGCAATTCCAATTTCAAGTTTGTTCATACTACCCCAGCTTCCGTTCCTGTATACTTTGGTGTTCTAAATAACAGCTCAAATCCGTTTGGTTCTAGAGAAAATAGGAGTGATGGTCCATCTTTAAACCATTCCTCGTATCCTTGCTCACAGAACATGGGAAGAGTACTAATGGGTCCATGA 1761 0.4509 MDATATNFGKPYAGSELRLDGASDDPNRAGSGQNSTARYKLMSPAKLPISRSPCITIPPGMSPTSFLESPVLLSNMKVEPSPTTGSLPKLHQTAASTVSASFPVTTACFNTNIVDDRKSSFFQFKPHNRSNMVPADFNNLVSEQSTQVKGPGKAESFTPSPLVESDRAVPSNELSLSSPVQMVSSGACAPVDVDVDEFNHKGNTATGLQTSHVEVRGNGLSVAAERTSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSPDGQITEIIYKGTHDHPKPQPSCRYSAGTIMSLQGDRSDKASALAGRDDKASNMYCQVSHEADPNNTTELSPVATNGDSLEGAGFVSNRTNDEVDDEDLFSKRRKMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGPSTAGGQTRIKLEESDTISLDLGMGMTSASENRSNGQGKMLLSEFGNGQNHTSNSNFKFVHTTPASVPVYFGVLNNSSNPFGSRENRSDGPSLNHSSYPCSQNMGRVLMGP 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00023 586 FunFam WRKY transcription factor 218 288 - -
Gabi3551g00023 586 MobiDBLite consensus disorder prediction 556 578 - -
Gabi3551g00023 586 SUPERFAMILY WRKY DNA-binding domain 396 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 FunFam WRKY transcription factor 33 391 457 - -
Gabi3551g00023 586 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 502 IPR044810 GO:0003700
Gabi3551g00023 586 ProSiteProfiles WRKY domain profile. 223 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 MobiDBLite consensus disorder prediction 556 586 - -
Gabi3551g00023 586 ProSiteProfiles WRKY domain profile. 399 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 Gene3D WRKY domain 220 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 Gene3D WRKY domain 389 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 SMART WRKY_cls 228 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 SMART WRKY_cls 404 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 MobiDBLite consensus disorder prediction 144 165 - -
Gabi3551g00023 586 Pfam WRKY DNA -binding domain 229 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 Pfam WRKY DNA -binding domain 405 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 SUPERFAMILY WRKY DNA-binding domain 225 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3551g00023 586 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3551g00023 Gabi-Chr3551 177350 184151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3551g00023 42 586 WRKY Transcription Factor Family AT4G26640 55.495 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3551g00023 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00023 - - gmx:100816583 999.964