Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00019 ATGGCTGCTATTCTCTCTCTCTATCCTTACAATCCCTTGCTATATTGTCCAACTCCTCCTTCGTCTTCTGGTTCTTCATCGTGCATCGACGGAAGAGGAAGCAAGGCGGTGGTGCTTGCGGCGCATTCCAATCCGAAGATTCTCAAGACCAATAGGAAGTCAAAGTACGGACAGGTCCTGTCGCCATACGACAGCGATGAAGAAGATGAAGGAATTGAGGAGGAGAAGGAGGACGACGACGACGACGATGGTTGGCTCTCTAATGAGGAATTTGCTGAGCCTGCTAACTTTGATGTTGGTAGCAAGAGATTTAAGTCAAACGCAATTAAAGGAAAAGATAGACAACAAGAAAAGGAGTTCGGTGTGAGATCTTTTAACAATGGAGAAAGCACTAAAACGCCTGGAAGTGAGAGATTGGCATCCTTGCGACTAAATTCCAGTGGAAAGCTTGGCAGAAATCTAAAGGAAAAAAAGTATCCACGGTTGTCCGAAGAGATTGATTTGGATGTGAAATGGATACCACTTCTTGATTACTTGACCACCTTTGGAATTAAGGAATCACATTTTATCCAAATGTATGCGAGGCACATGTCATCACTTCAAATCAATGTATGTTCTGCACAGGAAAGGTTGGAGTACTTATTTAGTGTTGGTGTTAAACATAGAGATGTACGAAGAATCCTTTTGAGGCAGCCACAAATTCTGGAGTATACAGTGGATAACAATTTAAAGTCTCATGTTGCTTTCTTGATGGGCTTGGGTATACCTAATTCCAGAATAGGGCAAATCATTGCTGCTGCTCCATCTCTGTTTTCTTATAGTGTTGAGAATTCGTTAAAACCAACTGTGAGATATTTAATTGAGGAAGTTGGCATCAAGGAAAAGGATTTGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTTGTCCAGCGTATTGACATTTCATGGAATACTCGATATATGTTTCTTACAAAAGAGTTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGAAGAAACATCCCCAGCTTCTCCATTACAGCATAGATGATGGATTACTGCCAAGAATAAATTTTCTAAGGAGCATAGGAATGAAAAATTCAGACATCTTGAAAGTCTTGACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAGGAGAACCTAAAGCCCAAGTATTTGTACTTGGTAAATGAACTTCACAATGAGGTGCAATCCTTGACCAAATACCCGATGTACCTTAGCTTGTCTTTGGACCAGAGAATTCGACCTCGTCATAGGTTCTTGGTTTCCCTGAAGAAAGCTCCAAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACTGATGAGTGCTTTTGTGAACAATGGGCTGGAACTAGTCTGGATAAATATTTGGCATTTCGTCAGAGATTATTAATCCGAAAATTCGCTGAAAAATATGAAAGAAAAATGTGA 1455 0.411 MAAILSLYPYNPLLYCPTPPSSSGSSSCIDGRGSKAVVLAAHSNPKILKTNRKSKYGQVLSPYDSDEEDEGIEEEKEDDDDDDGWLSNEEFAEPANFDVGSKRFKSNAIKGKDRQQEKEFGVRSFNNGESTKTPGSERLASLRLNSSGKLGRNLKEKKYPRLSEEIDLDVKWIPLLDYLTTFGIKESHFIQMYARHMSSLQINVCSAQERLEYLFSVGVKHRDVRRILLRQPQILEYTVDNNLKSHVAFLMGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLIEEVGIKEKDLSKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELHNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCEQWAGTSLDKYLAFRQRLLIRKFAEKYERKM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00019 484 ProSitePatterns EF-hand calcium-binding domain. 79 91 IPR018247 -
Gabi3551g00019 484 MobiDBLite consensus disorder prediction 108 136 - -
Gabi3551g00019 484 PANTHER CGI-12 PROTEIN-RELATED 207 456 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 Gene3D Transcription termination factor 3, mitochondrial 241 471 IPR038538 -
Gabi3551g00019 484 Gene3D Transcription termination factor 3, mitochondrial 153 240 IPR038538 -
Gabi3551g00019 484 MobiDBLite consensus disorder prediction 63 88 - -
Gabi3551g00019 484 FunFam Transcription termination factor MTERF9, chloroplastic 236 471 - -
Gabi3551g00019 484 SMART mt_12 371 403 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 SMART mt_12 261 293 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 SMART mt_12 298 330 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Gabi3551g00019 484 MobiDBLite consensus disorder prediction 58 88 - -
Gabi3551g00019 484 MobiDBLite consensus disorder prediction 121 136 - -
Gabi3551g00019 484 Pfam mTERF 158 431 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi3551g00019 mTERF 1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00019 K15031 - gmx:102660933 744.962