Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00011 ATGGAGCATCACTTCTCATCTTTACCATTCCTTTTATTTTCACTGATTTTTATGCTTATCATCTCACGGATTCTGAGAGTAAGAAAAAGATTCAAAGCCACAGAAAAAACATCGAACCTTCCCCTGGGACCATGGAAGCTTCCTGTCATTGGAAGCATACACCATCTGATTGGCTCTCTACCCCATCACCGGTTGAGAGAACTAGCCCAAAAATATGGCCCTCTTATGCACCTTAAACTTGGTGAAGTATCAACCATCGTGGTTTCTTCTCCAGAATTTGCCAAAAAGGTGTTGAAAACCTATGATGCCATCTTTGCTCAAAGACCTCATCAAATTGGTGCAGATATCATGTGTTATGGTTCCACTGACATTGCCACTGCCCCATATGGAGGTTACTGGAAGCAGCTAAGAAAAATATGCTCAGTAGAGCTTCTTGGCACTAAACGTGTGCGATCATTCCAATCAATAAGGGAAGAAGAGGTATCGAATTTAATAAGATATATTTCTTCTAACACTGGATCTTCTGTCAACCTCAGTGACAGAGTGGTTTGCATGACAAGTGCCATTACTGCAAGGGCAGCATTTGGTGAAAAATGCAAGGACCAAGAAGAATTCCTTTCATTGATCAAGAAGCTTGTGAGACAGGTCGAAGGTTTGATTGTTTTTGACTTGTTTCCTTCTCAAAAGTGGCTTCACCTGATCACTGGAATGCAGCCTAAACTGGAGGAGTTGCATCGAAAATTGGATACAATTTTTGAAAACATCATCAGAGTGGCAGTGACAAAGACCGGTGAAGTACAAGTACAGGGTCTTCTCTCTGTTCTCTTAAATATTAAAGATCATGAAGACTTTGAGTATCCCTTGACAATCGACAACATCAAAGCTGTAATTTTGGACTTGTTTGTTGCTGGAAGTGATACAACATCTGGAGTAATAGAATGGGCCATTTCAGAGATGGTGAAAAACCCAGGAGTAATGATCAGAGCTCAAGAAGAAGTTAGAAAAGTTTTTGGTAGCAGAGGTTACACTGATGAAACAGCTCTTCAAAAACTAAAGTATCTGAAAGCGGTCATAAAAGAAACATTGAGATTACACCCACCTTTTCCTCTGCTTCTCCCAAGAGAATGTAGAGAAACTTGTGAGATTAAAGGGTACACAATACCTGCAGGAAACAAAGTGATAATCAATGCATGGGCAATTGGAAGAGACCCTGATTACTGGAGTGAAGCAGAGAAGTTTTGTCCAGAGAGATTTTTGTATTCTTCAATTGATTACAAGGGTTCCAATATTGAATACATACCTTTTGGTGCTGGAAGGAGAATGTGTCCGGGCATTTTGTTTGGTATGTCTGGTATTGAACTTTCTCTTGCACACTTGTTGTACTACTATAATTGGAAACTTCCTGATGGAACCAAGGAAAATCTAGAAATGACTGAAGCATTGGGCTCCTCTTCAAGAAGGAAAACAGATCTAATCTTAGTTCCTATTTCTTACAATCCTGTACCTGATTGA 1512 0.3988 MEHHFSSLPFLLFSLIFMLIISRILRVRKRFKATEKTSNLPLGPWKLPVIGSIHHLIGSLPHHRLRELAQKYGPLMHLKLGEVSTIVVSSPEFAKKVLKTYDAIFAQRPHQIGADIMCYGSTDIATAPYGGYWKQLRKICSVELLGTKRVRSFQSIREEEVSNLIRYISSNTGSSVNLSDRVVCMTSAITARAAFGEKCKDQEEFLSLIKKLVRQVEGLIVFDLFPSQKWLHLITGMQPKLEELHRKLDTIFENIIRVAVTKTGEVQVQGLLSVLLNIKDHEDFEYPLTIDNIKAVILDLFVAGSDTTSGVIEWAISEMVKNPGVMIRAQEEVRKVFGSRGYTDETALQKLKYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIPAGNKVIINAWAIGRDPDYWSEAEKFCPERFLYSSIDYKGSNIEYIPFGAGRRMCPGILFGMSGIELSLAHLLYYYNWKLPDGTKENLEMTEALGSSSRRKTDLILVPISYNPVPD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00011 503 SUPERFAMILY Cytochrome P450 42 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 Pfam Cytochrome P450 41 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 CDD CYP71-like 71 491 - -
Gabi3551g00011 503 Gene3D Cytochrome P450 33 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 FunFam Cytochrome P450 99A2 30 496 - -
Gabi3551g00011 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gabi3551g00011 503 PANTHER OS08G0105600 PROTEIN 63 500 - -
Gabi3551g00011 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00011 503 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3551g00011 Gabi-Chr3551 56384 59380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3551g00011 36 469 Cytochrome P450 AT3G48310 41.379 3.37e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00011 - K23807 gmx:100779851 738.413