Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3551g00007 ATGGGGTTGGAGGTTCATATTTTCCTGTCCACAATCCTTCCTCTCTTCCTCTTTGTGTTCATGATAATCAACATAATTTGGAGATCAAAAACCAAGAACTCAAACTCCAAGTTACCACCAGGACCAAAGAAACTACCTCTCATAGGGAATATCCACCATCTAGGAACTCTGCCTCATCGCTCCCTAGCAGGATTGGCAAATCAATATGGCCCTCTCATGCATATACAGCTTGGTGAGCTTTCCTGCATAGTGGTATCTTCACCACAAATGGCCAAAGAAGTGATGAAAACACATGATATCAACTTTGCAAATAGGCCTCATGTGCTTGCTGCAGAAGTAATCACTTATGGTAATAAGAGCATGAGCTTCAGTCCACATGGAACTTATTGGAGGCAGATGAGAAAGATTTGTGCAATGGAGCTACTAGCACCCAAGCGTGTTGAGTCCTTCAGGTCAATTAGGGAAGAAGAGTTGTTAAATCTTGTCAAGGAGATATCCTTGAATGCAGGGTCGCCTATGAATCTCAGTAAGAAGATTCATTCATTGGCATATGGAATAACATCACGAATTGCTTTTGGTGCAAAATCCAAGGACCAACAAGTTTATATAGATCTTATGAAAGATCTCTCAAAGGTTGTTGCAGGGTTCTCTCTTGCTGATCTATATCCTTCCATTGGAGTTCTTCAAGTTCTTACTGGGATTAAGACTAAAGTTGAGAAGATGCATCGAGAAATAGATAGGATACTTGAAAACATTGTAACAGATCACAGAAACAGAATTTTGGAGACAGAAGCTGTTGGTGAAGAAAATGGGGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAGAATAGTGACCTCGAACATCCTCTATCTGACAGTATTGTCAAAGCAACCATTTTGGACATTTTCAGTGCTGGAAGTGACACTTCATCAACAACAATCGATTGGGCAATGTCAGAACTGGTGAAAAACCCAAGGGTGATGGAGAAAGCACAAATGGAGGTAAGAAGAGTATTTGATGGGAAAGGATATGTGGAAGAAACAAGTATTCATGAACTGAAATACTTGAGATCAGTTATCAAAGAAACCTTGCGTCTACATCCACCTATTGCATTGTTGCTTCCAAGGGAATGCAGTGAAAGATGTGAGATTAATAGGTATGAGATACCACCCAAGAGCAAGGTCATTGTTAATGCATGGACAATTGGGAGGGATCCTAACTATTGGATTGAAGCTGAGAAATTTTATCCAGAAAGGTTCCTTGATAGCTCAATTGATTACAAAGGTGCAGAATTTCAATTTATCCCATTTGGTGCTGGAAGAAGGATTTGCCCTGGCATCACATTTGGCATTGTTAATGTTGAAATTTCACTTGCAAATTTGCTTTTCCATTTTGATTGGAAGATGGCAAAAGGAGACATGCCTGAAGAGCTTGATATGACCGAATCCTTTGGCTTGTCAGTAAAAAGAAAACAGGATTTGCAGTTGATTCCTATCATTTATCACTCAGCTACGAGTTAA 1524 0.3976 MGLEVHIFLSTILPLFLFVFMIINIIWRSKTKNSNSKLPPGPKKLPLIGNIHHLGTLPHRSLAGLANQYGPLMHIQLGELSCIVVSSPQMAKEVMKTHDINFANRPHVLAAEVITYGNKSMSFSPHGTYWRQMRKICAMELLAPKRVESFRSIREEELLNLVKEISLNAGSPMNLSKKIHSLAYGITSRIAFGAKSKDQQVYIDLMKDLSKVVAGFSLADLYPSIGVLQVLTGIKTKVEKMHREIDRILENIVTDHRNRILETEAVGEENGEDLVDVLLRLQKNSDLEHPLSDSIVKATILDIFSAGSDTSSTTIDWAMSELVKNPRVMEKAQMEVRRVFDGKGYVEETSIHELKYLRSVIKETLRLHPPIALLLPRECSERCEINRYEIPPKSKVIVNAWTIGRDPNYWIEAEKFYPERFLDSSIDYKGAEFQFIPFGAGRRICPGITFGIVNVEISLANLLFHFDWKMAKGDMPEELDMTESFGLSVKRKQDLQLIPIIYHSATS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3551g00007 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PANTHER OS08G0105600 PROTEIN 62 502 - -
Gabi3551g00007 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi3551g00007 507 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3551g00007 507 CDD CYP71-like 68 495 - -
Gabi3551g00007 507 FunFam Cytochrome P450 71D8 31 499 - -
Gabi3551g00007 507 SUPERFAMILY Cytochrome P450 39 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3551g00007 Gabi-Chr3551 26511 34277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3551g00007 18 501 Cytochrome P450 AT5G25120 41.057 5.43e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3551g00007 - - gmx:100819247 810.831