Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3540g00001 ATGGCAGAGGTGAAGCTACACGGATTTTGGTATAGTCCCTTTCTTTGGAGGGTAGTATGGACCCTAAAGCTAAAGGATATACCATATGATTATACAGAGGAAGACCGCTTCAACAAGAGTGCTCAACTTCTTAAATACAACCCAGTGCATAAGAAGGTTCCAGTGCTCGTTCATGCTGAAAAACCCATATGTGAGTCCATGGTCATCGTTGAATACATTGATGAAACATGGCCACAGAATCCATTGCTTCCTGCTGATCCATATGATAAAGCTCTTGCACGGTTTTGGGTCAGATATGCTGATGACTTGGTGGTTTCTGCAGTTGTGGCACTCATCCTTAGCAGCACTGCTGAAGAGCTGGAGAAGGCAATAAAGAAGATCTTGGAGCATCTAAGAGTTGTTGAGGATCAGTGTTTAGATGATGAGAAGAAATTCTTTGGAGGAGACACTATTAACATTGTTGACATAGCTTTTGGATCCATCATCAGTTTTCTTGAGATTGCGATAGATATCTTTGAAGTGAAGATCCTAGAAGCTGAGAAATTCCCTCATTTTCATTCATGGTTTATTAATTTTAAGGATGTCCCACTCATCGCAGAAATTATTCCTGAACCGGAGAAACTTGTTGCTTATATTAAGTCTCTCAGAGAAGAAAGATCAGTAGCTTTTATTAAGTGA 678 0.4012 MAEVKLHGFWYSPFLWRVVWTLKLKDIPYDYTEEDRFNKSAQLLKYNPVHKKVPVLVHAEKPICESMVIVEYIDETWPQNPLLPADPYDKALARFWVRYADDLVVSAVVALILSSTAEELEKAIKKILEHLRVVEDQCLDDEKKFFGGDTINIVDIAFGSIISFLEIAIDIFEVKILEAEKFPHFHSWFINFKDVPLIAEIIPEPEKLVAYIKSLREERSVAFIK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3540g00001 225 Pfam Glutathione S-transferase, C-terminal domain 119 189 - -
Gabi3540g00001 225 Coils Coil 117 137 - -
Gabi3540g00001 225 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Gabi3540g00001 225 SFLD Main.3: Omega- and Tau-like 1 218 IPR045073 -
Gabi3540g00001 225 CDD GST_N_Tau 4 77 - -
Gabi3540g00001 225 Gene3D - 86 222 - -
Gabi3540g00001 225 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Gabi3540g00001 225 Gene3D Glutaredoxin 1 85 - -
Gabi3540g00001 225 FunFam Glutathione S-transferase U9 83 222 - -
Gabi3540g00001 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Gabi3540g00001 225 FunFam Glutathione S-transferase GSTU6 1 83 - -
Gabi3540g00001 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Gabi3540g00001 225 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Gabi3540g00001 225 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Gabi3540g00001 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Gabi3540g00001 225 SFLD Glutathione Transferase (cytosolic) 1 218 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3540g00001 Gabi-Chr3540 32213 33214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3540g00001 4 215 Glutathione S-transferase Gene Family AT3G09270 47.664 2.13e-57 179