Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3535g00032 ATGTTGGCTATGAGAAATCATGGATATGCCTTGGCTGTTTCGTTTTGTTTTATCATCCTCATAGCAGTCTCACAACCAACAGATCCTTCAGAAGTAAATGCACTGATAGACATCAAGAAAAGTTTGATTGATCCCATGAACAATCTGAGGAACTGGAATAAGGGTGACCCATGTGCATCAAACTGGACTGGGGTTTGGTGTTTTGATAGGAAGGGTGCTGATGGTTACTTCCATGTCCGCGAGCTCTATTTAATGACTATGAATCTCTCTGGAAGTCTAGCACCTCAGCTTGGTCAACTATCTCAACTTGAGATACTGGATTTCATGTGGAACAATCTGACAGGCACAATACCAAAGGAGATTGGAAATATTACATCATTGAAACTCTTGCTCCTGAATGGGAATAACTTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTTCAAATTTGAATAGACTCCAAGTTGACGAAAACCAATTATCAGGTCCTATACCAGATTCATTTGCCAACTTGGTCAATGCTAGACACATCCACATGAACAACAACTCGTTTAATGGTCAACTTCCATACAAACTTTCAAACCTATCCAATCTTCTGCACTTGCTTGTGGACAACAATAACTTATCTGGCCATCTTCCACCACAATTCTCCATGTTACATGGGTTGGCAATACTCCAACTTGACAACAATAATTTCAGCGGGTATGGAATTCCTTCAACCTATGCAAACTTATCCAGTCTAGTAAAACTAAGTCTAAGAAACTGCAGTCTGCAAGGAGCTATTCCTGATTTCAGTTCAATACCCAAGCTTACCTATTTAGATCTTAGCTGGAATCAGTTTACCGGACACATACCATCAAATAAACTTTCAGACAATATGACGACCATTGATCTGTCCAATAATCGTCTCAATGGATCTATTCCTCAAAGCTTCTTATATCCTCATCTTCAAACATTGTCACTTCAAAACAATTTGCTGTCTGGGTCTATCCCTTCTAGCATATGGAAGAACATGTCCTTCAGTATGAAGGCTAAACTTACAATTGATCTCGATAACAACTCACTTTCGGATGTTTTCGGAAATCTAAACCCCCCGCCAAATGTTACCTTGAGGCTTTCTGGCAATCCTATCTGCAAGAATTCTAACATAAAAAGTATTGGTCAATATTGTGGACCTGAAGGAGATGAAGTAGCTCAAAACTCAAAAAATTCAACTGTTTGTCCAGTTCAAGCTTGTCCAGTGGATAATTTCTATGAATATGCCCCCTCTTCCCCAGTTCCTTGCTTTTGTGCAGCACCTCTGAGAGTTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATACAACTCGTTTGGAATCATACATAACTCATTCCTTGAACTTAGACATCTATCAATTATCAATAGATTCATATGCTTGGGAAGAGGGACCTCGTCTTAGAATGTATTTAAAAATTTTTCCTTCGTACAATGATTCCCACTCTAATGAGTTCAATAAGAGTGAGGTCCATCGCATTAAAGGTATATTTACATCATGGCGATTTCCTCGCACTGACTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTAGGACCTTATGCAAATATAATTATTGATTCAGAGAGGAGGAAAACTAGTCCGGGCATATTAGCTGCTGCTATAATAGCAGCTATTGCTTGTGTTTTAGCAATATCTGCAATAATCATGCTCCTGATTTTTCGAAGACAGTATAAATACCAGCACAAGATTTCCAGGAAACGTATGTCCTCTAATATATCTATCAAAATAGATGGCTTGAAAGCATTCACTTATAAGGAATTGGCTCTTGCTACTGACAAATTTAACAGCTCAACTAAAGTTGGTGAAGGAGGTTATGGGAATGTCTACAAGGGCATTTTATGTGATGAAACATTTGTAGCCATTAAGCGAGCAGAAGAAAGTTCCTTGCAAGGCCAAAAGGAGTTTTTGACTGAGATTGAGCTTTTATCAAGGTTACACCATCGGAATCTTGTCTCACTGATTGGATACTGTAGTGAAGAAGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAAATAAAAAAACCAAGGAAAGCCTAAATTTTGGTATGAGGTTACGAATTGCAATGGGTGCAGCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAACCAGTAACATACTTCTGGACTCCAAGTTTATAGCTAAAGTGGCAGATTTTGGACTGTCACGGCTTGCTCCATACTTAGATGAAGAAGAAACTCCTAGATATGTGTCAACAGTTGTGAAGGGAACACCAGGTTACCTGGACCCAGAATATTTGTTAACTCATAAGTTGACTGACAAAAGTGATGTCTATAGCCTAGGAATTGTGTTTCTGGAACTTCTGACAGGCATGAGACCAATATCACATGGGAAAAACATTGTCCGCGAGGTTAATGTGGCTTGTCAAACTGGGATTATGTATTCCATTATAGACAGCGAAATGGGTTTCTATCCATCTGATTGCTTGGACAAGTTTGTAACACTGGCACTCAGTTGTTGCCTAGACAATCCACAAGAAAGACCATCAATGCTAGATGTGGTGAGGGAACTGGAACATATTATTGCAATGTTACCAGAAACTCATGAAACTTGTTTCTCTGATGTTTCCTTATGTAATTCTGGTAAAATGGCACCTTCATCATCATCATCAGGATCCAACGTGACAAGAGAGGACCAACATCTCATGTCCTCCTCGTATGTGTCTGGAAGTGATCTTGTCAGTGGTGTTGTTCCCACCATTGTTCCTCGCTGA 2874 0.3967 MLAMRNHGYALAVSFCFIILIAVSQPTDPSEVNALIDIKKSLIDPMNNLRNWNKGDPCASNWTGVWCFDRKGADGYFHVRELYLMTMNLSGSLAPQLGQLSQLEILDFMWNNLTGTIPKEIGNITSLKLLLLNGNNLSGSLPDELGNLSNLNRLQVDENQLSGPIPDSFANLVNARHIHMNNNSFNGQLPYKLSNLSNLLHLLVDNNNLSGHLPPQFSMLHGLAILQLDNNNFSGYGIPSTYANLSSLVKLSLRNCSLQGAIPDFSSIPKLTYLDLSWNQFTGHIPSNKLSDNMTTIDLSNNRLNGSIPQSFLYPHLQTLSLQNNLLSGSIPSSIWKNMSFSMKAKLTIDLDNNSLSDVFGNLNPPPNVTLRLSGNPICKNSNIKSIGQYCGPEGDEVAQNSKNSTVCPVQACPVDNFYEYAPSSPVPCFCAAPLRVGYRLKSPSFSYFPPYTTRLESYITHSLNLDIYQLSIDSYAWEEGPRLRMYLKIFPSYNDSHSNEFNKSEVHRIKGIFTSWRFPRTDFFGPYELLNFTLLGPYANIIIDSERRKTSPGILAAAIIAAIACVLAISAIIMLLIFRRQYKYQHKISRKRMSSNISIKIDGLKAFTYKELALATDKFNSSTKVGEGGYGNVYKGILCDETFVAIKRAEESSLQGQKEFLTEIELLSRLHHRNLVSLIGYCSEEGEQMLVYEFMPNGTLRDWISGKNKKTKESLNFGMRLRIAMGAAKGILYLHTEANPPIFHRDIKTSNILLDSKFIAKVADFGLSRLAPYLDEEETPRYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGIVFLELLTGMRPISHGKNIVREVNVACQTGIMYSIIDSEMGFYPSDCLDKFVTLALSCCLDNPQERPSMLDVVRELEHIIAMLPETHETCFSDVSLCNSGKMAPSSSSSGSNVTREDQHLMSSSYVSGSDLVSGVVPTIVPR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3535g00032 957 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Gabi3535g00032 957 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Gabi3535g00032 957 Pfam Protein kinase domain 621 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3535g00032 957 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Gabi3535g00032 957 SUPERFAMILY L domain-like 43 385 - -
Gabi3535g00032 957 CDD STKc_IRAK 626 894 - -
Gabi3535g00032 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Gabi3535g00032 957 FunFam Leucine-rich repeat protein kinase family protein 584 695 - -
Gabi3535g00032 957 Gene3D Transferase(Phosphotransferase) domain 1 696 909 - -
Gabi3535g00032 957 SUPERFAMILY Protein kinase-like (PK-like) 605 912 IPR011009 -
Gabi3535g00032 957 PANTHER RECEPTOR-LIKE PROTEIN 55 38 894 - -
Gabi3535g00032 957 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Gabi3535g00032 957 Gene3D Ribonuclease Inhibitor 193 392 IPR032675 -
Gabi3535g00032 957 SMART serkin_6 620 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3535g00032 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 696 907 - -
Gabi3535g00032 957 Gene3D Phosphorylase Kinase; domain 1 590 695 - -
Gabi3535g00032 957 ProSiteProfiles Protein kinase domain profile. 620 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3535g00032 Gabi-Chr3535 366900 377412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3535g00032 1 900 Receptor kinase-like Gene Family AT5G01950 63.135 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gabi3535g00032 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3535g00032 - - gmx:100815005 1521.91