Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3535g00016 ATGGAAGCTCAAGGTCAACAGTGGCAGGGTTCAGAGAGAGTAATGAAAGAGACATGCTGGTCATTGGTATTATTATTTGCATTTACTGTGATATTAATATTATGTAACAAGTTATGGTTGAAGCCTCAAAGGATCCGATCGGTGCTTAAGAAGCAAGGCATCAATGGACCAAAACCTTCCTTCCCTTTTGGTAACATTTCTGAGATGCAAACAAGCCATCAACAAATTCCTCTCTCTGTTGATGCCTTTGACCAATGGGTTTATTCCCTCTTCCCATATCTTCATACTTGGAAGCAACACTATGGTTCAATGTACATGTATTCTACCGGAATCAAACAGCATCTATATGTGGAGAAGCCCGAATTAATAAAAGAGTTGAATCTACATAGGTCCTTAGATCTAGGAAGACCTTCTTATCTGTCCAAACCATTGAAGCCAATGCTGGGTGGAGGCATCCTTAGGGCTAATGGATTACAATGGGCCTTCCAACGGAATCTTATTGCTCCTGAGTTCTTCCTTACCAAAATTAAGAATATGGTGGATTTTATGGAAGAATCTGCCATGGAAATTATCAGAACATGGGAAAGCCGTATAACAGAAAGTGCAGGGGGAATTGCAGAGTTGGTGATTGATGCCGAATTGAAGGTTCTTACAGCGGATATAATTTCAAAAGCTTGTTTTGGAAGCTCTTATGCACAAGGCAATCAAATTTTTGCAAAACTGGCGGCTATGCAAGCTGCACTATCAAAGCCTAGCATTTTATTTGGATTTCTAAACCAAAGATTTCTTCCCACCAAGGAAAACAAAGAGCTAAGGAAGTTGGAGAAAGAGGTGGACACACTGATACTGAAAATCATCAATGACCGTCAAGTACAAAACCAAAATAGTAGCATAAATGGGAATCAAAAGGACCTATTACAAACAATAGTAGAAGGTGCTGCCAGTGCCACCACTTCAAATAGTAGTGGAAAGGGTAACATGAACAGATTAATCATCGACATGTGCAAAAATATCTACTTTGCTGGATCTGAGAGCAGCGCGCTTGCAGTTACTTGGACACTGCTGCTACTTTCCTTACATCCTGAATGGCAACAACGTGTTAGATCTGAGATTGTGGAGACCTATGATAACATGTTGCCTCATTCATTTCATGACATGGACAAACTTCGAAAGTTGAAAACATTGACAATGGTGATTCAAGAGAGTCTTCGTCTTTATGGGCCAGCTGTTATAGCTTCAAGGGAAGCTTTGGCTGAGATGAAAGTGGGGGAACTTGTGCTACCTAAAGGCATAAACATGTGGTTTTTAATACCTGCATTGCACCGTGACCCTGATAACTGGGGGCCAGATGCTAATGAGTTCAAGCCAGAAAGGTTTGAAGGGGGTGTTTCAGCAGCATGTAAGTATCCACAAGCTTATATACCATTTGGCTTTGGGAGTCGAATTTGCTTAGGCCAAAACTTTGCAATGATGGAAATCAAGGTTGTGCTCTGTCTTCTTCTGTCTAACTTCTCCTTTTCTCTTTCCCCAAACTATAATCATTGCCCTGTGTATAAAATGCTGTTAATGCCAAAATATGGTGTTAGGCTTCTTGTTAGCAAGCTTCGGAGGTACATAGCAGATCCTTCGCACGTGATGCAACCGGATGATGTGGAAGTTCGGGAGAACTTAAAGACTCCCGTAGGACCACTAAAGATTCTCGATCGTGGCGAGAAGCAGCTGAGGAGCAAGATCATTCCGATGGTCAAGGTGCAGTGGACCGGAAGGACTCCTGAGGAGTGTACTTGGGAGCGA 1794 0.4203 MEAQGQQWQGSERVMKETCWSLVLLFAFTVILILCNKLWLKPQRIRSVLKKQGINGPKPSFPFGNISEMQTSHQQIPLSVDAFDQWVYSLFPYLHTWKQHYGSMYMYSTGIKQHLYVEKPELIKELNLHRSLDLGRPSYLSKPLKPMLGGGILRANGLQWAFQRNLIAPEFFLTKIKNMVDFMEESAMEIIRTWESRITESAGGIAELVIDAELKVLTADIISKACFGSSYAQGNQIFAKLAAMQAALSKPSILFGFLNQRFLPTKENKELRKLEKEVDTLILKIINDRQVQNQNSSINGNQKDLLQTIVEGAASATTSNSSGKGNMNRLIIDMCKNIYFAGSESSALAVTWTLLLLSLHPEWQQRVRSEIVETYDNMLPHSFHDMDKLRKLKTLTMVIQESLRLYGPAVIASREALAEMKVGELVLPKGINMWFLIPALHRDPDNWGPDANEFKPERFEGGVSAACKYPQAYIPFGFGSRICLGQNFAMMEIKVVLCLLLSNFSFSLSPNYNHCPVYKMLLMPKYGVRLLVSKLRRYIADPSHVMQPDDVEVRENLKTPVGPLKILDRGEKQLRSKIIPMVKVQWTGRTPEECTWER 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3535g00016 598 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Gabi3535g00016 598 Pfam Cytochrome P450 93 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PANTHER CYTOCHROME P450 FAMILY MEMBER 31 527 - -
Gabi3535g00016 598 Gene3D Cytochrome P450 39 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3535g00016 598 SUPERFAMILY Cytochrome P450 85 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3535g00016 Gabi-Chr3535 191791 217199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3535g00016 122 532 Cytochrome P450 AT5G24900 45.542 1.59e-135 399