Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi352g00005 ATGGAGGACAAAGAAGAGAACCAAGATCATAACCACTCATCTCTCCTCCCTAATCGCAACCCCATCACAACCAAAGAAGAGTCTCTAAAAAAACCCATTGGTGGTGGCAGTGGCAGTGGCAGTGATAGGCTAAAGAGAGATGAGTGGAGTGAAGGAGCCGTTTCTACCCTTCTTGAGGCCTATGAAGCCAAATGGGTACTCAGAAACAGAGCCAAACTCAAAGGTCATGACTGGGAAGATGTTGCAAGATATGTCTCATCAAGAGCAAACTCTACCAAATCACCAAAGACACAGACACAGTGCAAGAACAAGATTGAGTCTATGAAGAAAAGGTATAGATCAGAGTCTGCTACAGCAGATGCATCATCTTGGCCTTTATACTCTCGTCTTGATCTTCTTCTGCGTGGAACTGGACCTATATCAACACTACCACCATCAACACCAATAGCACCAGCAACAACACATGCACCTTCTCAATCACCACACCGTTTGTTGTTAGAACCGTCGCTGGCAGTGTCACAATCTCCTCATCAGCCACCTCCTCCTGTTGCTCCTCAACCACTTGCAACTGCACAAAACTCACATGGATCCAATGGTGTTGATAGAGTAGCCAAGGAAGATGGGTTAGGTACTAAGTCATTTGACCATGTATCTAACAAGAATCCATTGGATACGGATAGCAGTACACCTGCACTTTACAGTGAAAAGGACAAGCTAAGATGCAACAAGAGGAAGATGAAAACAGAGAACAACAAGCGTAGAAGGAAAGAGGATATGGAAATAGCAGAAAGCATAAGGTGGCTAGCAGAAGTGGTTGTAAGGTCAGAACAAACAAGAATGGACACAATGAAAGAGATAGAGAGGATGAGAGTTGAAGCTGATGCAAAGAGAGGGGAAATGGATCTTAAGAGAACTGAAATCATTGCCAATACACAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTAAGAATTGGAAGGAGTTAA 1008 0.4335 MEDKEENQDHNHSSLLPNRNPITTKEESLKKPIGGGSGSGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPISTLPPSTPIAPATTHAPSQSPHRLLLEPSLAVSQSPHQPPPPVAPQPLATAQNSHGSNGVDRVAKEDGLGTKSFDHVSNKNPLDTDSSTPALYSEKDKLRCNKRKMKTENNKRRRKEDMEIAESIRWLAEVVVRSEQTRMDTMKEIERMRVEADAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi352g00005 335 MobiDBLite consensus disorder prediction 214 230 - -
Gabi352g00005 335 MobiDBLite consensus disorder prediction 143 160 - -
Gabi352g00005 335 MobiDBLite consensus disorder prediction 1 48 - -
Gabi352g00005 335 Gene3D - 49 114 - -
Gabi352g00005 335 MobiDBLite consensus disorder prediction 143 232 - -
Gabi352g00005 335 FunFam Trihelix transcription factor ASIL2 49 114 - -
Gabi352g00005 335 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 321 IPR044823 -
Gabi352g00005 335 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi352g00005 Gabi-Chr352 110181 112707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi352g00005 31 164 Trihelix Transcription Factor Family AT3G14180 32.609 3.74e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi352g00005 Myb_DNA-bind_4 4.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi352g00005 - - gmx:100799917 457.988