Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3527g00001 ATGGTGTCATTTCTGCACTTGCTTCTAGCTCTTCCTCTGTTGGTATGGATCCTTTTGCAGTTATACAAAACCATTAAGAACCCATCAACCCGTCCACCAGGTCCAAAAGGCCTTCCCATCATTGGCAATCTTCATCAACTTGATAGTTCAAATCTCCATTTTCAACTATGGAAGCTCTCAAAGATCTATGGTTCCCTTTTTTCCTTGCAAATTGGCTTTAAGCAAGCCATTGTTATTTCCACACCTAAACTAGCAAAAGAGGTCCTCAAAGACCATGATCATGATGTATGTAGTAGACCTCCCTCCACTGGCCCACAAAAATTGTCTTACAATGGTTTAGAGATGATATTTTCCCCTTATAATGAATGCTGGAGAGAAATCAGGAAAATTTGTGTAGTCCATTTCTTCAGCTCCAAACGGATCTCTAGCTTTTCCCATGTAAGAAAATTTGAGGTCAAGCAAATGATCAAAAAGATATCTGGACATGTTAATTCTTCCAAAGTTACGAACTTGAGTGAGATCATAATGTCTGCGTCAAGTGCCACAATCTGTAGGATGGCTTTTGGGAGAAAATATGAAGAGGAAGGAGCAGAAAGAAGCAAGTTCCATGGGCTGCTTAATGAGTCACAGGCCATGTTCCTTTCCTTCTTTGTTTCAGATTATATTCCTTTCATGGGGTGGATTGATAAACTCACTGGGTTATTTTCTCGTCTTGAAAACACTTACAAGGCATTGGATGTGTTTTTCCAACAAGTCATTGAAGAGCACCTTAATCCTAATAGGCAGAAAGAAACCCAAGACGAGGATGATATAGTTGATGTGTTACTTCAGCTAAAGAACCAGGGTCGCCTGTCTATTGACCTCACCAATGATCACATCAAAGCTGTCATCATGGACATACTTGTAGCAGCAACTGATACTAGTGCAGCCACGTCAGTTTGGGTAATGACTGGATTGATGAAGAACCCAAGAGTGATGAAAAAAGCTCAAGAGGAAGTTAGGAGTCTCTATGGCAGCAAGAAAGAGTTTATAGATGAAGATGATATTCAAAAGCTTGAATATCTGAAGGCAGTGATAAAAGAGACACTGAGGTTTTATGCACCAGCACCACTAGTACCAAGAGAAACCAATAAAAGTTTCATTATAGATGGGTATGAAATACAACCCAAGACATTAGTGTATGTGAATGTTTGGGCCATTCAGAGGGACCCTCAAGCTTGGAAAGACCCTGAAGAGTTTTACCCTGAGAGATTCTTAAACAATGATATTGATTTTAAGGGACAACATTTTGAGCTAATTCCATTCGGTGCAGGGCGTAGAATTTGCCCAGGCATACCATTGGGAATTGCCACAGTTGAGCTTATAACTGCAAACCTTCTTAATTTATTTGATTGGGAAATGCCTGCCGGGTTGAACAGGGAAGACATAGACACTGATGGGCTTCCAGGACTTGCCCGACACAAGAAGAATCATCTTTGCCTTGTTGCCAAGAACTATATGTGA 1503 0.4059 MVSFLHLLLALPLLVWILLQLYKTIKNPSTRPPGPKGLPIIGNLHQLDSSNLHFQLWKLSKIYGSLFSLQIGFKQAIVISTPKLAKEVLKDHDHDVCSRPPSTGPQKLSYNGLEMIFSPYNECWREIRKICVVHFFSSKRISSFSHVRKFEVKQMIKKISGHVNSSKVTNLSEIIMSASSATICRMAFGRKYEEEGAERSKFHGLLNESQAMFLSFFVSDYIPFMGWIDKLTGLFSRLENTYKALDVFFQQVIEEHLNPNRQKETQDEDDIVDVLLQLKNQGRLSIDLTNDHIKAVIMDILVAATDTSAATSVWVMTGLMKNPRVMKKAQEEVRSLYGSKKEFIDEDDIQKLEYLKAVIKETLRFYAPAPLVPRETNKSFIIDGYEIQPKTLVYVNVWAIQRDPQAWKDPEEFYPERFLNNDIDFKGQHFELIPFGAGRRICPGIPLGIATVELITANLLNLFDWEMPAGLNREDIDTDGLPGLARHKKNHLCLVAKNYM 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3527g00001 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PANTHER CYTOCHROME P450 71B11-RELATED 16 497 - -
Gabi3527g00001 500 CDD CYP71-like 63 492 - -
Gabi3527g00001 500 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 Pfam Cytochrome P450 32 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3527g00001 500 FunFam Cytochrome P450 83B1 19 495 - -
Gabi3527g00001 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3527g00001 Gabi-Chr3527 22231 24192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3527g00001 21 500 Cytochrome P450 AT4G31500 47.107 2.07e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3527g00001 - - gmx:100806470 744.577