Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3519g00005 ATGGCACAATTGCCACCTAAGATTCCAAACATGACACCCAATTGGCCTGAATTTTCTTCTCATCAGAAGATACCTTCCCTCACAAGCATGTCACCAAATGGTGTAACCAACACAAATATATCAAACAACCACCACCATCATCACCGTCACCATCAAAACCCTTCATGGGTGGATGAGTTTCTCGACTTCTCGTCGGCAAGACGCGGGTCCCACCGACGGTCGGCTAGTGACTCCATCACCTTCATGGAGGCACCAATGCTCAAGGGTGGGGTTGACAGGTGCGAGTTTGATAGGTTTGATGATGAACAATTCATGTCCATGTTCAGTGACGAGGTTTCAGGGAAAGCCATGATGCCACCATCATTGTCCTCTTCCTCCAACCCTTCAAGCCCTTCTGATCATAACAGCGGCATCAACGATGAGAAAGAAATGAACCGTGAAAAGGAGGAAGATGAGAAGCAAGAGGAGCAACAATTGAAGAATGAAGCATATTTGGATCAAAGCCAATGCAAACAGGAAATCACAGAAGCTCTGAATGATGATGATGATGATGATGATAATAGTAATAACAATGCAAACACAACAACTTGTTCCAATGACAAAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCTAGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAATACTGTCTCCACGGGTTGCATTTTTGGATCATCATCGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTGGCACAAGACAAGATCTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAAAACATCAAGAAGATGGACAGTGCTGTAGGGTCACCATCCCCATCACCAAAAGCAAGATGTGATACTCATTCTGAAAAGGAACATCTTATCAATGTTTGA 1005 0.4388 MAQLPPKIPNMTPNWPEFSSHQKIPSLTSMSPNGVTNTNISNNHHHHHRHHQNPSWVDEFLDFSSARRGSHRRSASDSITFMEAPMLKGGVDRCEFDRFDDEQFMSMFSDEVSGKAMMPPSLSSSSNPSSPSDHNSGINDEKEMNREKEEDEKQEEQQLKNEAYLDQSQCKQEITEALNDDDDDDDNSNNNANTTTCSNDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSILSPRVAFLDHHRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDSAVGSPSPSPKARCDTHSEKEHLINV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3519g00005 334 Coils Coil 138 166 - -
Gabi3519g00005 334 CDD bZIP_plant_RF2 207 257 IPR044759 GO:0003700|GO:0006355
Gabi3519g00005 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 13 41 - -
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 118 135 - -
Gabi3519g00005 334 FunFam Basic leucine zipper 61 205 278 - -
Gabi3519g00005 334 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 1 53 - -
Gabi3519g00005 334 Pfam Basic region leucine zipper 203 251 IPR004827 GO:0003700|GO:0006355
Gabi3519g00005 334 Gene3D - 205 278 - -
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 307 334 - -
Gabi3519g00005 334 Coils Coil 285 305 - -
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 113 202 - -
Gabi3519g00005 334 SUPERFAMILY Leucine zipper domain 206 259 IPR046347 GO:0003700|GO:0006355
Gabi3519g00005 334 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 253 IPR004827 GO:0003700|GO:0006355
Gabi3519g00005 334 PANTHER BASIC LEUCINE ZIPPER 34 1 318 - -
Gabi3519g00005 334 MobiDBLite consensus disorder prediction 136 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3519g00005 Gabi-Chr3519 77726 80029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3519g00005 1 283 bZIP Transcription Factor Family AT3G58120 55.049 3.16e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3519g00005 bZIP_2 2.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3519g00005 - - lang:109363232 434.491