Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3518g00004 ATGGATGCTTTACCATTGTCTGCTTTCCATGCACATGCTCTAGGGGCTTTAGCAGAGGTTGCTGGACCTGGCCTTAACTTTCATCTTGGTACTGTACTTCCTCCTTTGCTGTCAGCAATGGATGATGATGACAAGAATTCGATCATGAACCCTAAAAATATAGGAGGCCAGATGGATGATACAGGGAGCAATTTTACACAACTTGGAGATATTGACGATGATCCAACAGATTACATTGACTTTAGTGATGAGATTGAATATGACATGCCTAATGAAATGGAAGAGGACATTCAAAATGACTTAATTAATAGTGTGTCAAATGTCCTTCTGTCGACACCGACAAAGAATATTGATATTTCAATTGAGGTTGGAATGGAATTTTCTGAAAGGAAAGATGTAATAGACTGGTACAAAGCATTTGGTATGACAAAAGGTTTTGGAATTCGGGCACGTCAAACCAAGAAGAATTACATGAAGCTAACATGTGCTAGAGAGGGTTATCCAATATCGAAGACAAACAATGTTGGTGAAGTATGTGAAACCAAATCAAGGAATACATCATCATCACGAATAGGGTGTAAAGCTTGTTTCAAGGCTTCTACGAATGGAGACACAAACATGTGGAAAATTAAATATTTTGACGACAACCATAATCATGGTTTGGTTACTCCGAAGAGTGTTCCATATATAAGATCATATAGGCAAATGCCTGGTGTTGCTAGATCATTAGTTGAAAAATTCAATGACTCGGGCTTGCCCATTGGAAAGGTGGCCACCATCCTTAGAGGCCCTGATTTATTGTTTGACAGTCGAGATTGTTATAATCATATGAAAAATGTAAGCAGGAAAATATATGACGTTGGGGATGCACAAGCCGTGGTACGTTATTGTAATAGACAACAATCAATGAATCCAAATTTCTTTTATTCGATTAAGTATGACGATGAGGATCGTCTGGAAAGTTTTTTTTGCATTGATGCGAGGTCCAGACACTCATATGATCTTTTTGGAGATTTCATCACTTTTGACATGACATATAGGACTAACAAATATGCATTGCCTTTTGGACCCTTTGTCGGTGTGAATAACCATTTGCAGTCAATCTTGTTTGGTTGTGCTCTATTAAAAGATGAAACTGAAGATACTTTTGTGTGGCTATTTGAGGAATGGCTACGAGCAATGAATGGAAAACATCCAGGCGCAATAATTACTGACCAGTTGAACTTGCAGGACAAGAGAAGTTGTCATGTGTACCAAGACCATGGGTCTTTCAAGAAGGAATTCAATGATTGTATCTATAAGTCCAACAGTATTCAAGAATTTGAAGACAAATGGCATCGTCTTATTGTTGAGTATCGTCTTATTGGGAATGAGTGGATGCATTCACTTTATTCAATTAGATCATCTTGGATACCAATATTTAACCGTTCCACTTTTTTTGCCGGTATGCACACTACTCAGCGCAGCGAAAGCATCAATGCATTCTTCGATGATTTTGTTACATCTGGCACTACATTGAATGAATTTGTGGAGAAATACAACCAAGCAGTAGATGCTCGATATGAGTCATTGAAAAAGGCAAATTTTGAGTCCATGCACAAAGAAAGACGCTTGCAATTCAATATGCTATTGGAGGAGCATGCAGCAAAAGTGTATACACGTGCAATTTATGTAAAGTTTGTTACTGAGCTCTCTCATATCCTAAGTTTCTCCAATGACAAACTTACGACTGATGGTGAATGGGTTTCATATCGAATACCAGAACACTTCATTTTGCGACGTTGGCACAAGGAAGGAAATGATGTGTTAAGTAAAGAGAGAGAAATGTGTTTGCTTAATAGAGATGGATTGGTTCATAGCCTTCACCTAAGCTCTAAATGTAATAGACTTATTGAGCTTGCACAGAGGTCAGATGAAGCATTTCAATTTATTTATGATGGTCTTGATTCTCTTGCTCTATCTGCTGAAAAGTTTTCAACATATGAGGAGAGTAATGGTAGGGATACTAATGTTCAGTGCTTGAATTCTCAACTAGAAGATTCTTCTATGATAAACTTGAAAGATCCTAACATTTCCCAGACGAAAGGCCGGAAAAGGATCTGTAGCGGGATTGAAGAAGCATCAAAGCAATCCAACTATGCGGTTATAGCTACTAATAGATTGTTATAA 2169 0.3785 MDALPLSAFHAHALGALAEVAGPGLNFHLGTVLPPLLSAMDDDDKNSIMNPKNIGGQMDDTGSNFTQLGDIDDDPTDYIDFSDEIEYDMPNEMEEDIQNDLINSVSNVLLSTPTKNIDISIEVGMEFSERKDVIDWYKAFGMTKGFGIRARQTKKNYMKLTCAREGYPISKTNNVGEVCETKSRNTSSSRIGCKACFKASTNGDTNMWKIKYFDDNHNHGLVTPKSVPYIRSYRQMPGVARSLVEKFNDSGLPIGKVATILRGPDLLFDSRDCYNHMKNVSRKIYDVGDAQAVVRYCNRQQSMNPNFFYSIKYDDEDRLESFFCIDARSRHSYDLFGDFITFDMTYRTNKYALPFGPFVGVNNHLQSILFGCALLKDETEDTFVWLFEEWLRAMNGKHPGAIITDQLNLQDKRSCHVYQDHGSFKKEFNDCIYKSNSIQEFEDKWHRLIVEYRLIGNEWMHSLYSIRSSWIPIFNRSTFFAGMHTTQRSESINAFFDDFVTSGTTLNEFVEKYNQAVDARYESLKKANFESMHKERRLQFNMLLEEHAAKVYTRAIYVKFVTELSHILSFSNDKLTTDGEWVSYRIPEHFILRRWHKEGNDVLSKEREMCLLNRDGLVHSLHLSSKCNRLIELAQRSDEAFQFIYDGLDSLALSAEKFSTYEESNGRDTNVQCLNSQLEDSSMINLKDPNISQTKGRKRICSGIEEASKQSNYAVIATNRLL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3518g00004 722 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 121 654 IPR031052 GO:0006355
Gabi3518g00004 722 Pfam FAR1 DNA-binding domain 136 222 IPR004330 -
Gabi3518g00004 722 Pfam MULE transposase domain 340 408 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3518g00004 Gabi-Chr3518 5953 9139 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3518g00004 FAR1 1.3e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3518g00004 - - vvo:131633311 501.901