Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3501g00001 ATGGCCAATATGTTTGCCTATGCACAAATAATTGCAGCATTCCTTTGTTTTCTCTACATCTTCCATCGTAGAAGATGTTGCAAATACCCCTTATTCATAGACTGGCCTTTCCTTGGTATGTTACCACAACTCCTATGTAACTTGTCGCAAATCCACGATTTTGTAACCAATTTGTTGAAACGAAAAGGTAGCACTGGTGAGTTCACAGGACCTTGGTTCACAAAAATGAACTATATGCTCACTTGTGACCCCATCAACGTGCACCACATTCTCATCAAGAATTTTGACAGCTATGTTAAAGGGTCAGAGTTTCGTGAGATTTTTGAACCTTTGGGACATGGGATATTCACTGCTGATTCAGATACATGGAGATACAGCAGGTCTTTGTTCCATTCTTTGCTTAAACAAAGAAACTTTGACGTGTTTCTGGTGAATACCATTCAGAAGAAGGTTGAGAGAAGTTTGCTTCCAATATTGAATCATGTTCAAAAACAAGGGATTGTGGTGGATCTCCAAGATGTGTTCAAACGTTTCACATTTGATAACATATGCTCCTTGGTTCTAAGACATGATCCTAATTGTCTTTCCATTGATTTCCCAGAAGTTGAATGTGAGAAGGCTTTTACAGAAGCAGAAGAGTGTATATTCTACAGACACACAGTGCCAAAAAGTGTTTGGAAGTTGCAGAACTGGCTTCAAATTGGTCCAGAGAAGAAGCTCACAGAAGCATGCAAAACATTTGATGAATTCATTTATGCATGTATAGTATCTAAGCGAGAAGAGTTAAGCAAGTACAATAAAAATGAAATGGCTGATCAGTCTCACGTTGACTTTCTAACAGGTATGATGAAAGAAGAGAAAGGACAATTACATGATGACAAGTTTCTAAGAGATGAATCAATCGGTCTTTTCCTAGCAGGGAGAGGTGCCACAGCTTCAGCACTCACTTGGTTCTTCTGGCTTGTTGCTACACACCCCTTAGTGGAAGCCAAGATTCTTGAAGAGATTAAAGAAAATTTTGGTGACAAAGGAGAGAATAAGCAAGGAATTTTTGGCGTGGAAGAGGTGAAAAAGCTAGTTTATCTGCATGGTGCTTTATGCGAAGCTCTGAGGCTTTTCCCTCCCTTTCCTTTTGAGCGCAAGAAAGCAGTTAATGCTGATACACTTCCAAGTGGTCACATTATTAATCCTAAAACTATAATATTATTTCATTTGTATACAATGGGGAGACTTGAAGAAATATGGGGAAAAGATTGCTTGGAATTCAAGCCAGAGAGATGGATCTCTGACAGAGGAGGCATTGTTTATGTACCATCTTACAAATTCATCAGTTTTAATGCAGGACCAAGGATTTGCTTGGGAAAAGACATGTCCTTCATTCAAATGAAGATTGTGGCAACTGCTATTTTGTGCAATTATCATATCCATGTGATGGAAGGTCATGTTGCTACCCCGAGCCTTTCCATTGTGCTTCTTATGAAGCATGGTTTGAAGGTTAAGATTACAAAAAGAGAAATTTGA 1521 0.3886 MANMFAYAQIIAAFLCFLYIFHRRRCCKYPLFIDWPFLGMLPQLLCNLSQIHDFVTNLLKRKGSTGEFTGPWFTKMNYMLTCDPINVHHILIKNFDSYVKGSEFREIFEPLGHGIFTADSDTWRYSRSLFHSLLKQRNFDVFLVNTIQKKVERSLLPILNHVQKQGIVVDLQDVFKRFTFDNICSLVLRHDPNCLSIDFPEVECEKAFTEAEECIFYRHTVPKSVWKLQNWLQIGPEKKLTEACKTFDEFIYACIVSKREELSKYNKNEMADQSHVDFLTGMMKEEKGQLHDDKFLRDESIGLFLAGRGATASALTWFFWLVATHPLVEAKILEEIKENFGDKGENKQGIFGVEEVKKLVYLHGALCEALRLFPPFPFERKKAVNADTLPSGHIINPKTIILFHLYTMGRLEEIWGKDCLEFKPERWISDRGGIVYVPSYKFISFNAGPRICLGKDMSFIQMKIVATAILCNYHIHVMEGHVATPSLSIVLLMKHGLKVKITKREI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3501g00001 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 CDD CYP86A 67 497 - -
Gabi3501g00001 506 Gene3D Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Gabi3501g00001 506 SUPERFAMILY Cytochrome P450 19 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 Pfam Cytochrome P450 34 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3501g00001 506 PANTHER CYTOCHROME P450 24 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3501g00001 Gabi-Chr3501 14684 16204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3501g00001 9 505 Cytochrome P450 AT2G23180 45.365 1.06e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3501g00001 - - gmx:100792360 741.11