Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3495g00005 ATGTTCTCAAAAATGAGAAGCTCTAGCATTCAAGTGGGTCTCATAGTTGTTCTCCTAACAGCTAGTGTTGTTTTATCCGATGACAATGTGCCAATTCCAGCTGACAAGGCCCAAGTGAGAACATGGTTCAATAACAATGTGAGGCCCTTGGCACAAAGCAAGAGCTTGGACCCTGGACTAGTTGCTGCAGAGGCTGGTGCTAGGGTTGTTAAGGTCATGCAAGATGGCAGTGGGAATTTCAAGACCATCACTGATGCCATTAAGAGCATCCCTATTGGAAACACAAAGCGTGTCATTATCTACATTGGAGGAGGAAATTATCATGAGAAAATCAAAATTGAGAGGACAAAGCCTTTTGTCACATTTTATGGGGCACCAGGGAACATGCCGAACTTGACCTATGGGGGCACTGCACAACAATATGGCACTGTTGACAGTGCTACATTGATTGTTGAATCAGATTATTTTGTGGCTTCTAACATCATAATCTCGAATTCAGCACCAAGACCTGATGGAAAGAGGCCAGGAGCTCAAGCGGTTGCTCTAAGAATTTCTGGTGACAAAGCAGCGTTTTATAATTGCAAGTTTTTTGGATTCCAGGACACAATTTGTGATGATAGGAATAGGCATTTTTTCAAAAACTGCTTCATTCAAGGCACTGTGGATTTTATTTTTGGAAGTGGCAAGTCACTATATTTGAACACTGAATTGAGAGTGCTTGGTGACAATGGGATGACAGTGATAGTGGCACAAGCAAGAAAAAGTGAGGCAGAGGACAGTGCCTACTCATTTGTGCATTGCCATATTACTGGAACTGGAACTGGCACTTACTTGGGAAGAGCATGGATGTCTCATCCCAAAGTGATCTTCGCTTACACCACTATGAGCAATGTTATTAATAAAGCAGGGTGGAGTAACAACAATCACCCAGAATATGACAGATCTGCATATTTTGGAGAGTACCAAAACAAGGGACCCGGTGCAGATGTCAGTGGGCGTGCCTCAATCACAAAGAAACTAAGTTTCGCGGAGGTCAAACCTTACGTAACGCTTGGCATGCTTCAGGCCTCCAAATGGCTACTTCCTCCTCCAAGAGTCTAA 1101 0.4351 MFSKMRSSSIQVGLIVVLLTASVVLSDDNVPIPADKAQVRTWFNNNVRPLAQSKSLDPGLVAAEAGARVVKVMQDGSGNFKTITDAIKSIPIGNTKRVIIYIGGGNYHEKIKIERTKPFVTFYGAPGNMPNLTYGGTAQQYGTVDSATLIVESDYFVASNIIISNSAPRPDGKRPGAQAVALRISGDKAAFYNCKFFGFQDTICDDRNRHFFKNCFIQGTVDFIFGSGKSLYLNTELRVLGDNGMTVIVAQARKSEAEDSAYSFVHCHITGTGTGTYLGRAWMSHPKVIFAYTTMSNVINKAGWSNNNHPEYDRSAYFGEYQNKGPGADVSGRASITKKLSFAEVKPYVTLGMLQASKWLLPPPRV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3495g00005 366 Gene3D - 65 362 IPR012334 -
Gabi3495g00005 366 FunFam Pectinesterase 65 362 - -
Gabi3495g00005 366 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Gabi3495g00005 366 Pfam Pectinesterase 70 335 IPR000070 GO:0030599|GO:0042545
Gabi3495g00005 366 SUPERFAMILY Pectin lyase-like 65 360 IPR011050 -
Gabi3495g00005 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3495g00005 Gabi-Chr3495 61917 63515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3495g00005 9 366 Carbohydrate Esterase AT1G69940 58.101 1.10e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3495g00005 K01051 - gmx:100786427 587.03