Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3495g00004 ATGGCCTCAAAGACCAGAAGCTCTACCTTTAAGGTGGCTCTCATTGTAGTTTTCCTAAGCGCCAACGTTGTTTTATCGGATGACACTGTGCCAGTTCCCGCTGACAAGTCCCAATTGAGCGCATGGTTCAATAAAAATGTGATGCCCTTGGGTCAGAGAACGAGCACCTTGGACCCTGCACTTGTGGCTGCAGAGGCTGGTGCTAAGGTTGTTAAGGTAATGCCAGATGGAAGTGGGGATTTCAAAACCATCACTGATGCCGTTAAGAGCATCCCTGTTGGGAACACCAAGCGTGTCATTGTCTACATTGGAGGTGCAAATTATAATGAGAAAATCAAAATTGAGAGGACAAAGCCTTTTGTTACATTGTATGGGGAACCAGGGAACATGCCAAACTTGACCTTTGGTGGCACAGCAAAGGAATATGGCACTGTTGACAGTGCTACATTGATTGCTGAATCAGATTACTTCGTGGCTGCTAACATTATTATCTCGAATTCAGCACCAAGACCTGATGGAAAGAGGCCAGGAGCTCAAGCGGTTGCGTTGAGAATTTCTGGTGACAAAGCAGCGTTTTATAATTGCAAGTTTTTTGGATTCCAGGACACAATTTGTGATGATAGGAATAGGCATTTTTTCAAAGACTGCTTAATTCAAGGCACTGTGGATTTTATTTTTGGAAGTGGGAAGTCACTATATTTGAACACTGAATTGAGAGTGCTTGGCGACAGTGGGATGACTGTGATAGTGGCACAAGCAAGAAAAAGTGAGGAAGAGGACAGTGGCTACTCATTTGTGCATTGCGACATTACAGGAACTGGGACTGGCACTTTCTTGGGAAGAGCATGGTTTTCTCATACCAAAGCAATCTTCGCTTACACCACCATGAGCAGTGTTATAAATAAAGCAGGGTGGAGTAACAACAATCACCCCGAATATGACAAAACTGCACACTTTGGAGAGTACCAGAACAAGGGACCTGGTGCAGATGTCAGTGGGCGTGCCACAATCACAAAGAAACTAAGTGAAGCGGAGGTAAAACCTTACATATCACTTGAGATGATTGAAGGCTCCCAATGGCTACTTCCTCCTCCAACTCCCAAAGTATAA 1110 0.445 MASKTRSSTFKVALIVVFLSANVVLSDDTVPVPADKSQLSAWFNKNVMPLGQRTSTLDPALVAAEAGAKVVKVMPDGSGDFKTITDAVKSIPVGNTKRVIVYIGGANYNEKIKIERTKPFVTLYGEPGNMPNLTFGGTAKEYGTVDSATLIAESDYFVAANIIISNSAPRPDGKRPGAQAVALRISGDKAAFYNCKFFGFQDTICDDRNRHFFKDCLIQGTVDFIFGSGKSLYLNTELRVLGDSGMTVIVAQARKSEEEDSGYSFVHCDITGTGTGTFLGRAWFSHTKAIFAYTTMSSVINKAGWSNNNHPEYDKTAHFGEYQNKGPGADVSGRATITKKLSEAEVKPYISLEMIEGSQWLLPPPTPKV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3495g00004 369 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Gabi3495g00004 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 361 - -
Gabi3495g00004 369 SUPERFAMILY Pectin lyase-like 66 363 IPR011050 -
Gabi3495g00004 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Gabi3495g00004 369 Gene3D - 66 364 IPR012334 -
Gabi3495g00004 369 FunFam Pectinesterase 66 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3495g00004 Gabi-Chr3495 49681 51277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3495g00004 12 365 Carbohydrate Esterase AT1G69940 57.062 1.67e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3495g00004 K01051 - gmx:100816036 605.134