Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3487g00001 ATGGCGTTAGAAGTGCTTGACGCGCTTGATTCAGCACGCACGCAATGGTATCACGTGACGGCCATAGTAATAGCAGGCATGGGTTTTTTCACCGATGCCTACGACCTCTTTTGCATCTCCACAGTTGCAAAACTATTAGGCCGTTTATATTACTTCGATCCTTCAACAAACAAACCGGGAAAACTCCCAACCCCAGTTAACAATTTCGTAACCGGTGTGGCCCTAATAGGAACACTCTGTGGTCAATTATTCTTTGGCTATCTCGGAGACAAACTAGGTCGCAAAAAAGTTTATGGAATCACACTCGTTCTCATGGTCGTTTGTGCCGTATGTTCTGGCCTGTCTTTTGGTGCATCGGCAAAGTCCGTTATGGGAACTTTGTGTTTCTTCAGGTTCTGGCTTGGGTTTGGTATTGGTGGTGACTACCCTCTCTCTGCCACCATCATGTCCGAATACGCCAATAAAAGGACACGTGGAGCTTTCATAGCTGCTGTCTTCGCCATGCAAGGCGTGGGAATCATCTTTGCAGGTTTGGTCTCCATGGTGTTGTCGAGTGTTTTCAAGTCTTACTTTGACGCTCCCACTTACACGCAGAACGAGGTGTTGTCAACACAACCCGAGGGTGATTTTCTATGGCGCTTAGTTCTCATGATTGGAGCCGTCCCAGCCATGTTGACTTTCTATTGGAGGATGAAGATGCCAGAAACGGGTCGTTACACTGCTATAATTGAAGGGAACGCAAAGCAAGCAGCTGCAGATATGGCTAGGGTTTTGGACATTGAAATCCAAGCAGATCAAGACAAATTAACAGAGTTCAAATCAGCAAACAATTACCCTTTATGGTCAAACGAGTTCTTTCAACGACATGGTCGTCACCTTATTGGAACAATGAGCGCGTGGTTCTTGTTAGACATTGCTTTCTATAGCCAGAACTTAACTCAGAAGGATATTTTCCCCGCAATGGGACTCATAGACAAGGACGTGGATATGAATGCTCTTGAAGAAGTGTTCCAAACCGCACGTGCCATGTTCGTGATTGCTTTGTGCGGAACCTTCCCTGGTTATTGGTTCACTGTCGCTTTCATTGAAAAGCTTGGACGCTACAAGATCCAACTCATTGGGTTCTTCATGATGTCTTTCTTCATGTTCGTCATTGGTGTCAAATATGATTACCTCAAGAATGACAACGCTCACCTCTTCGCTTTCCTCTATGCGTTGACGTTCTTCTTCGCCAACTTTGGACCGAACAGCACGACATTCGTGCTGCCAGCGGAGCTGTTCCCGACGAGGGTGAGGTCGACGTGTCATGCGCTGAGCGCAGCGGCGGGGAAGGCTGGTGCTATGGTTGCTGCTTTTGGAATACAAACCTACACCTTGGACGGTACACCGAAAAAGGTGAGAAGGGCGATGTTGATTCTGGCCGTGACTAACTTGTTCGGGTTCTGCGTTTCATTCTTGGTTACCGAAACAAAGGGACGATCGCTGGAACAAATTTCTGGTGAGGATGGAAGAGAGAGTGAACTCGCAGCAACACCAAATAATGATAGGGTTCCGGTCACTCGTCAGGTTTCGCGGACTGAGACAATGTGA 1590 0.4723 MALEVLDALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVAKLLGRLYYFDPSTNKPGKLPTPVNNFVTGVALIGTLCGQLFFGYLGDKLGRKKVYGITLVLMVVCAVCSGLSFGASAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMVLSSVFKSYFDAPTYTQNEVLSTQPEGDFLWRLVLMIGAVPAMLTFYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQADQDKLTEFKSANNYPLWSNEFFQRHGRHLIGTMSAWFLLDIAFYSQNLTQKDIFPAMGLIDKDVDMNALEEVFQTARAMFVIALCGTFPGYWFTVAFIEKLGRYKIQLIGFFMMSFFMFVIGVKYDYLKNDNAHLFAFLYALTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVAAFGIQTYTLDGTPKKVRRAMLILAVTNLFGFCVSFLVTETKGRSLEQISGEDGRESELAATPNNDRVPVTRQVSRTETM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3487g00001 529 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Gabi3487g00001 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Gabi3487g00001 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 17 495 - -
Gabi3487g00001 529 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Gabi3487g00001 529 NCBIfam phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
Gabi3487g00001 529 FunFam Inorganic phosphate transporter 1-6 17 513 - -
Gabi3487g00001 529 CDD MFS_PhT 22 491 - -
Gabi3487g00001 529 MobiDBLite consensus disorder prediction 513 529 - -
Gabi3487g00001 529 MobiDBLite consensus disorder prediction 497 529 - -
Gabi3487g00001 529 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3487g00001 Gabi-Chr3487 6147 9043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3487g00001 3 501 Inorganic Solute Cotransporters AT5G43360 62.818 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3487g00001 K08176 - gmx:100805284 884.404