Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3480g00011 ATGTCTTCAGAAGGAGATGGTATGGACATGGAAGGAGGAGACACCAAAACGTTGAAGGAGACACCAGAAAACAACTTCAAAGACCGAAAACCTTCATGGCCAAAGCTTCGCCGTGTGGACTCTCTCGATTTGGAAGCTGGAAGAGTTTCTATGAATGCAAACCACTCCTCCACGTTGGGTTGGATGACTACTCTGAGTTTAGCATTTCAAAGCATAGGCATAGTATATGGTGATCTTGGCACATCTCCACTTTATGTGTTCCAAAGCACTTTCAACAATGGTGTTCGTCACAAAGATGACATTCTCGGAGTCTTGTCAATTATAATCTACACCATTATACTCCTCCCCATGCTTAAATATGTCTTCATCGTACTTCGGTTTAACGACAACGGCAATGGTGGAGCGTTTGCGCTCTATTCATTGATATGTAGGAATGCGAAGTTGAGTTTGATTCCAAATGAACAACCAGAGGACAAGGAGCTCTCTAATTACAGTCTCCAAACACCATCTAATAAGCTCAAAAGAACACAAAAGCTAAAGCAGAGGCTTGAGAAGAGTCATATTGCAAGGGTTCTGCTTTTACTTGTAACCATTATGGGAACTTCCATGGTTATTGGAGATGGCATCCTTACTCCATCAGTTTCAGTTCTTTCTGCGGTGAGCGGGATCAGTAAGTCGTTAGGTCAAGATGCTGTTGTGGGGATCACTGTAGTGATATTAATATTCCTTTTTTCTGTGCAACGATATGGTACTGACAAAGTAGGCTCTTCATTCGCTCCAATTCTCTTAATGTGGTTTTTATTGAACGGAGGAATTGGTCTCTACAATTTATTCACACATGACATTGGAGTATTACGTGCTTTTAATCCAAAATATATAGTTGAATACTTCAAACGGAATGGTAAACAAGGATGGATATCACTAGGTGGAGCCTTTTTGTGCACCACAGGTTCTGAGGCCATGTTTGCTGACTTGGGTCACTTCAATGTGCGAGCCATTCAAATTAGCTTCTCTTCCATAACATTTCCTGCAATATTGGCTGCATACTGCGGACAAGCAGCATATCTAGGAAAGTTCCCTGGCCAAGTGTCTAATTCTTTCTATGCATGTATCCCTGACAAGTTATATTGGCCAACATTTGTTGTGGCTGTTGCTGCTGCCATCATAGCAAGCCAGGCAATGATTTCAGGAGCATTTTCCATCATTTCACAGGCTCAAAGTATGGGTTGTTTCCCAAGGGTTAAGATTGTGCATACTTCTACTAAGCACATGGGTCAGGTGTATATTCCTGAGGTCAACTACATGTTCATGGTTGCATGTATTGTGGTCAGTGCTGCCTTCAAGACCACAGAAAAAATTAGTCATGCATATGGCATTGCGGTAGTTTGTGATATGTTGATCACAACATGCCTGGTTTCCTTCATAATGTTGGTTATACGGAAGAAAAGCATATGGCTGGTTGCTCTATTCTTTTTGCCATTCAGTTGCATTGAATTGGTTTATTTTTCTGCACAACTAACCAAATTCGTCGAAGGTGGTTTTCTTCCTATTGTATTTGCTCTCTTCTTGACCATGGTCATGGGAATCTGGCATTATGTACACAAGGAAAGGTACATGTTTGAACTCAAGAACAAGGTTTCCACTGATTATTTGAGAAAACTGACCAACAACCCAAGTATTAATCGCGTTCCTGGAATTGGACTTCTCTATTCTGAGCTTGTACAAGGAATTCCTCCTATATTCCCACATTTCATTGCCAGCATACCATCCATCCATTCAGTTGTTGTGTTTGTTTCCATTAAGGCAATTCCTATTAGTAGAGTTATATTGGAAGAGAGGTTCTTGTTTCGGCAAGTGGAGCCGAGAGAATACAGAATGTTTCGTTGTGTTGTGAGGTATGGTTACAAAGATGCTGTTATGGATCCTCTTGAGTTTGAGTCCCAGTTAGTGCATCACCTTAAGGAATATATTCGACAAGAGAGCTTTATGCATGAGATTGAGGGAACAACAACAACAACTGAACAAGTACCTATTCCTAACAACAATGAGTGTGAGATGGTACCACAAGGTTCCACTATTATCCCAGACCAAGGTGCACTAGATGTGTCTCGTGCCTCTTCAGATTCCATTCAATCATTAGTTGTGGCCAAGTCATCCATTGTCACTACCCCACCCATTGAGGGAGTTGAAAATGAGATAGAATTTATAGAGAAGGCAATGGAGAAGGGTGTGGTGTATATGCTAGGGGAAGCAGAGGTTGTGGCAGACCCAAAATCATCCATCTTCAATAAGATTGTTGTCAACTATGCATATAGCTTCCTTAGAAAGAATTTTCGGCAAGGGTATAAATCAATGGCAATCCCTCACAAGAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2406 0.4115 MSSEGDGMDMEGGDTKTLKETPENNFKDRKPSWPKLRRVDSLDLEAGRVSMNANHSSTLGWMTTLSLAFQSIGIVYGDLGTSPLYVFQSTFNNGVRHKDDILGVLSIIIYTIILLPMLKYVFIVLRFNDNGNGGAFALYSLICRNAKLSLIPNEQPEDKELSNYSLQTPSNKLKRTQKLKQRLEKSHIARVLLLLVTIMGTSMVIGDGILTPSVSVLSAVSGISKSLGQDAVVGITVVILIFLFSVQRYGTDKVGSSFAPILLMWFLLNGGIGLYNLFTHDIGVLRAFNPKYIVEYFKRNGKQGWISLGGAFLCTTGSEAMFADLGHFNVRAIQISFSSITFPAILAAYCGQAAYLGKFPGQVSNSFYACIPDKLYWPTFVVAVAAAIIASQAMISGAFSIISQAQSMGCFPRVKIVHTSTKHMGQVYIPEVNYMFMVACIVVSAAFKTTEKISHAYGIAVVCDMLITTCLVSFIMLVIRKKSIWLVALFFLPFSCIELVYFSAQLTKFVEGGFLPIVFALFLTMVMGIWHYVHKERYMFELKNKVSTDYLRKLTNNPSINRVPGIGLLYSELVQGIPPIFPHFIASIPSIHSVVVFVSIKAIPISRVILEERFLFRQVEPREYRMFRCVVRYGYKDAVMDPLEFESQLVHHLKEYIRQESFMHEIEGTTTTTEQVPIPNNNECEMVPQGSTIIPDQGALDVSRASSDSIQSLVVAKSSIVTTPPIEGVENEIEFIEKAMEKGVVYMLGEAEVVADPKSSIFNKIVVNYAYSFLRKNFRQGYKSMAIPHKRLLKVGMTYEI 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3480g00011 801 NCBIfam potassium uptake protein 67 801 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi3480g00011 801 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 59 800 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi3480g00011 801 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3480g00011 801 MobiDBLite consensus disorder prediction 9 31 - -
Gabi3480g00011 801 Pfam K+ potassium transporter 68 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3480g00011 Gabi-Chr3480 29945 34664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3480g00011 4 801 Inorganic Solute Cotransporters AT4G13420 57.071 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3480g00011 K03549 - gmx:100798735 1138.25