Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3476g00002 ATGAATATAATGGACTTCCAAGTGGTTGTTCTCGCCGGTGGCCTCTCCAAGAAGCTCCTCCCCCTCGTATCAGAGGAGGTTCCAAACGCTTTACTTCCGGTGGCGAACCGTCCAGTTCTCTCTTACGTTCTTGAGCTCTTGGAGCTTAGCAACCTTAAAGATCTCATTGTGGTTGTTGAAGGTGAGGATGCGGCTTTTCATGTTGGGGGTTGGATTTCAGGGGCTTATGCTGATCGCCTTCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTAGGAACAGCTGGTGCAATTCGGGCCATTGCACACCACCTAACTGCCAAAGACATTTTGATTGTCAGTGGTGATCTTGTTTCTGATGTGCCGCTTGGAGCCGTTGCAGCTACTCATAGACGTCATGATGCAGTTGTCACTGCTATGCTTTGCCCTGCTCCTGTAAGTGGACCTTCAGAGTCAGGATCCTCTGGTGGGAAAGACAAAACCAAGAAACCCAGCCGCTACGATTTAATAGGGCTGGATCCCACAAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATACTCCGTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACAAGAAGTTCTAGATCAGAAGGGTGCATTTCATAGCTTAAGGCATGATGTATTGCCATATCTTGTCCGGAGTCAACTGAAATCGGAAGTATTATTAAATGGTATGCCACAAGCAGAAGAAAATGGAACTGAAAAGGTTATTTCTCAAAGCAATGAACAAATGCTATCTCAAATACTTGCTAATGCATCTGGACTGACCTTTCATCAACGGCATGCACTGGGTCCTAATGGTTCTACTTCTGTTCGAAGAATCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTACTGTGCTCGCTTAAATTCTATACAAGCATACAGTGACATAAATCGAGATGTGATAGGAGAGGCTAGTCATTTATCAGGGTATTCCTTCTCTGCCCAAAACAACATTATCCATCCTTCTGCAGAGCTTGGGGCAAAAACAACTGTTGGACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCAGTAGTTATGAATCATGTTACTATTGGGGACTGTTGTTCCATCCAAGGTTCTGTCGTCTGCAGCAATGTACAGCTCCAAGAACGTGCTGTGCTAAAAGATTGTCAAGTTGGAGCATGTTTTGTGGTCACTGCTGGTAGTGAGTTCAAAGGGGAGGTCTTGGCTAAGAAATGA 1389 0.4471 MNIMDFQVVVLAGGLSKKLLPLVSEEVPNALLPVANRPVLSYVLELLELSNLKDLIVVVEGEDAAFHVGGWISGAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILIVSGDLVSDVPLGAVAATHRRHDAVVTAMLCPAPVSGPSESGSSGGKDKTKKPSRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSILRAVGQIEIRADLMDAHLYAFKRSVLQEVLDQKGAFHSLRHDVLPYLVRSQLKSEVLLNGMPQAEENGTEKVISQSNEQMLSQILANASGLTFHQRHALGPNGSTSVRRIHKCCVYIAGSSKYCARLNSIQAYSDINRDVIGEASHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDCCSIQGSVVCSNVQLQERAVLKDCQVGACFVVTAGSEFKGEVLAKK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3476g00002 462 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 428 IPR029044 -
Gabi3476g00002 462 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 4 462 - -
Gabi3476g00002 462 Gene3D Hexapeptide repeat proteins 354 453 - -
Gabi3476g00002 462 CDD eIF-2B_gamma_N 6 223 - -
Gabi3476g00002 462 MobiDBLite consensus disorder prediction 145 164 - -
Gabi3476g00002 462 Pfam Nucleotidyl transferase 9 152 IPR005835 GO:0009058
Gabi3476g00002 462 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 353 IPR029044 -
Gabi3476g00002 462 CDD LbH_eIF2B_gamma_C 373 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3476g00002 6 454 Eukaryotic Initiation Factors Gene Family AT4G18300 22.222 9.05e-19 87.4