Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3469g00006 ATGGAGAGGAGGAAGGAGGGCAGTGATGATGATTACACTTCAGAGGAGGAAGGTAGTGAGGATTATAGGCGTGGAGGGTACCATGCTGTTCGTGTTGGAGACACTTTCAAGAATGGCTGCTATGTCGTGCAGTCCAAGCTCGGTTGGGGTCATTTTTCCACTGTCTGGCTTGCTTGGGACACTCTCAAATCGCGTTATGTAGCCCTTAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCAGAGGGGGACCCTGATGACAAGAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGTCAGCATGTGTGTATGGTTTTTGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATAATGACTATCGTGGGATTCCTCTCCCCATGGTTAAAGAAATCTGTTTACATATTTTGGTGGGCTTGGATTACTTGCATCGTGAGCTTTCTATCATACACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTGTCACTGATAGATACATCTAAGGATCCTAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAACGATAAGTCTGTGTCCAATAATGGGACCACTCAAGACAATAAAACTTTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAAATGCGGAGAAAGGCTAAGAAGGCAGCTCAGGGCTGTACTGGGAAGGAAAGTTCAGAGGAAGCTGAGGAGGATTATAAAGAACCCGAGCAAGAAGGTTGTAGTAATGGTGTGAAATCAAGTGTAGAATCAGTTGAAGATAAACCTGGTAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTTGAAAATGATGTTTCACAAGGAAGTCATGGTCATAGGAGAGGTAGCCGTTCCATGAGGAAGAAGTTGCTTGCATCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAAGTTCTTCTTGGATCTAAGTACTCAACTCCTGCTGACCTTTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGACAAATATGATAGGGATGAGGTAAGTGAGCTCGTTTTGTACTAA 1197 0.4219 MERRKEGSDDDYTSEEEGSEDYRRGGYHAVRVGDTFKNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYNDYRGIPLPMVKEICLHILVGLDYLHRELSIIHTDLKPENVLLLSLIDTSKDPRKSGAPLILPNTNDKSVSNNGTTQDNKTLNGDLTKNQKKKMRRKAKKAAQGCTGKESSEEAEEDYKEPEQEGCSNGVKSSVESVEDKPGSSLSKDESTKTFENDVSQGSHGHRRGSRSMRKKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDKYDRDEVSELVLY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3469g00006 398 MobiDBLite consensus disorder prediction 199 221 - -
Gabi3469g00006 398 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3469g00006 398 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 6 391 - -
Gabi3469g00006 398 SUPERFAMILY Protein kinase-like (PK-like) 36 383 IPR011009 -
Gabi3469g00006 398 Gene3D Phosphorylase Kinase; domain 1 27 126 - -
Gabi3469g00006 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gabi3469g00006 398 MobiDBLite consensus disorder prediction 278 301 - -
Gabi3469g00006 398 Gene3D Transferase(Phosphotransferase) domain 1 95 183 - -
Gabi3469g00006 398 SMART serkin_6 41 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3469g00006 398 ProSiteProfiles Protein kinase domain profile. 41 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3469g00006 398 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Gabi3469g00006 398 Pfam Protein kinase domain 41 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3469g00006 398 Pfam Protein kinase domain 316 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3469g00006 398 FunFam CMGC/SRPK protein kinase 27 126 - -
Gabi3469g00006 398 Gene3D Transferase(Phosphotransferase) domain 1 296 391 - -
Gabi3469g00006 398 MobiDBLite consensus disorder prediction 191 309 - -
Gabi3469g00006 398 FunFam Os03g0748400 protein 307 391 - -
Gabi3469g00006 398 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3469g00006 Gabi-Chr3469 105937 107686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3469g00006 11 391 EF-hand Containing Proteins AT5G22840 72.135 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gabi3469g00006 Pkinase 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3469g00006 K08832 - gmx:100791829 648.277