Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3465g00005 ATGGTGGTGGTGGTTGGTGGCGGTGGCGGTAATGGCTGCCGCAATGGTAGTGGTGGTCAGGACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGATTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTCCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGGGTCTCGTGATGTGATGGCGCTTTTTGGCGCCATTACGTTGCGAGAAAGCTTCGGGAATTGTGTCTTGCGGCAAAAATCGGATTTTGCACACGTGATCAACACAAAGATTGGTGTTGCGTTGGTACTTTACTGA 645 0.4682 MVVVVGGGGGNGCRNGSGGQDLTGLAGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLDFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAASHNFVAAPEPRLGRNRMDDGFLNEGSRDVMALFGAITLRESFGNCVLRQKSDFAHVINTKIGVALVLY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3465g00005 214 Pfam Protein kinase domain 17 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3465g00005 214 Gene3D Transferase(Phosphotransferase) domain 1 11 154 - -
Gabi3465g00005 214 SUPERFAMILY Protein kinase-like (PK-like) 20 154 IPR011009 -
Gabi3465g00005 214 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3465g00005 214 SMART serkin_6 3 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3465g00005 214 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3465g00005 Gabi-Chr3465 97420 105661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3465g00005 19 122 EF-hand Containing Proteins AT4G35310 51.923 6.06e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3465g00005 Pkinase 4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3465g00005 - - gmx:100812729 236.113