Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3462g00089 ATGGATTGTTGTGTTTGCACAACTATGCCATTAATATTAAGGCCTCCGAGGAATACAATATGCGGGGCTTGCTGTGAAGGAGCTAGGAGCATAATCAACATGATGAAAAATCTCGAAAGTGAGAAAGCAGAAGCAATCACCAATTCAAACGGTTCTCCAGTTTCACGACGAAATTCGAGTAAGACAATTGACGATTGTGTAAGATGGTTTTCAGAGCAAATAGACATGTTTAATCAACAAAAAGAAGACTTGGCTTTCCTCAGAGGCTTTGTTGCTGCCTTCAAAGCACAGATTCACACTGATATACTTGTCAGTCCGGGTAGCCATGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCAGCAAGATCAGAAATTTTTAAGAACATGCTAGAGTGTGATGAATGCAAAGCTCCACCAAGTAACACCATAACTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTTCTGGAGTTTCTCTACAGTGGTGCCTTGGCTGAGGAAAAATTGGAGAAACATGTTTATGCCTTGTCACAAGCAGCTGATAAGTATGTTATACCACACTTGCTGAAACACTGCGAACGACACATGCTTAGTTCACTAAGCACCTCTAATGCCCTTGAGACACTAGAGATTGCTGATACTTGTTCCAACTACAACTTGAAGGAGACAACATTGAATTTCTTAGTCAAAAACATTGAGCATATGGTGTCCTCCCCTAAATTTGAAGCTTTTGTGCATAGGAGTCCACATCTAACTGTGCAACTAGTTACAAGGGCATTCGCGAACGGTGCCAAATAA 804 0.4142 MDCCVCTTMPLILRPPRNTICGACCEGARSIINMMKNLESEKAEAITNSNGSPVSRRNSSKTIDDCVRWFSEQIDMFNQQKEDLAFLRGFVAAFKAQIHTDILVSPGSHGPPIPAHKSVLAARSEIFKNMLECDECKAPPSNTITIPDLNHEELESLLEFLYSGALAEEKLEKHVYALSQAADKYVIPHLLKHCERHMLSSLSTSNALETLEIADTCSNYNLKETTLNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLVTRAFANGAK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3462g00089 267 Gene3D - 203 266 - -
Gabi3462g00089 267 ProSiteProfiles BTB domain profile. 100 170 IPR000210 GO:0005515
Gabi3462g00089 267 SUPERFAMILY POZ domain 86 200 IPR011333 -
Gabi3462g00089 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 264 IPR044784 -
Gabi3462g00089 267 Gene3D Potassium Channel Kv1.1; Chain A 71 202 IPR011333 -
Gabi3462g00089 267 SMART BTB_4 100 202 IPR000210 GO:0005515
Gabi3462g00089 267 Coils Coil 28 48 - -
Gabi3462g00089 267 Pfam BTB/POZ domain 98 201 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gabi3462g00089 BTB 5.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3462g00089 K10523 - gmx:100777561 477.633