Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3462g00086 ATGTCTCCGGCCGCCGGAGTGAACGTCCCGCTCTTGCCGGATTCCAAATCAGCGGCGAAGCCGGCTTCTGTCTCCGGCGCCGTGTTCAATGTCGCCACCAGCATAATTGGCGCCGGCATCATGTCGATCCCGGCGATTATGAAGGTTCTTGGTGTGATTCCCGGTTTCGCCATGATTCTGATCGTTGCTCTGCTGGCTGAAGTTTCGGTGGATTTCCTCATGCGGTTTACAAATTCCGGCGAAACGACGACGTACGCCGGCGTCATGAAGGAGGCTTTGGGTCCACCGGGAGCATTAGCCGCGCAAGTTTGTGTCATAATCACCAACGTTGGGGGTTTAATTCTCTACCTAATCATCATCGGGGATGTGTTATCTGGAAAGCAAAATGAAGGTGAAGTTCACTTGGGCATTTTGCAACAATGGTTTGGAACTCAATGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTAGTTATGCTTCCATTGGTCTTGTACCGACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTATCAACTCTTCTTGCAGTGGTATTTGTTGGCGTATGTTGTTGGTTGGCTATTGTTGCTCTGGTGCAAGGAAAAACACAAACTCCAAGATTGTTTCCTCAGTTAGACCACCAAACCTCCTTCTTTGATTTGTTCACTGCAGTTCCCGTTGTAGTCACGGCCTTCACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCCAAGCCATCTGACATGACAACAGCTGTTCGATTAGCATTAATGCTTTGTGCTGTTATCTACTCTACAATAGGTCTATTTGGGTACCTGTTGTTTGGAGATTCAACCCAGTCAGACATTCTCATCAATTTTGATCAGAATGCTGATTCTGCAATTGGTTCCTTGCTCAACAATTTAGTACGTGTAAGCTATGCACTCCACATCATGTTGGTATTCCCTGTCGTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTCCTCTTCCCCAAGAAACCCCTGCTAGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTGCTTCTAGTCTTCTGTTACCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTGGGATCAACTTCTGCAGTGTGCCTTGCCTTCATTTTCCCTGGCACTATTGTTTTAAGGGATGCTCATGGTATATCAACAAGAAGGGACAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTGGCAAGTGTGATAGCCATTTCCACCAACCTGTACAATGCTTTTAGTAGCAAGTCATAA 1311 0.4569 MSPAAGVNVPLLPDSKSAAKPASVSGAVFNVATSIIGAGIMSIPAIMKVLGVIPGFAMILIVALLAEVSVDFLMRFTNSGETTTYAGVMKEALGPPGALAAQVCVIITNVGGLILYLIIIGDVLSGKQNEGEVHLGILQQWFGTQWWNSREFALLFTLVLVMLPLVLYRRVESLKYSSAVSTLLAVVFVGVCCWLAIVALVQGKTQTPRLFPQLDHQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALMLCAVIYSTIGLFGYLLFGDSTQSDILINFDQNADSAIGSLLNNLVRVSYALHIMLVFPVVNFSLRANIDEVLFPKKPLLATDNKRFVILTLVLLVFCYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGTIVLRDAHGISTRRDKIIALVMIILAVVASVIAISTNLYNAFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3462g00086 436 PANTHER AMINO ACID TRANSPORTER 15 419 - -
Gabi3462g00086 436 Pfam Transmembrane amino acid transporter protein 21 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3462g00086 Gabi-Chr3462 988413 990617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3462g00086 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.739 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3462g00086 - - gmx:100815694 705.671