Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3462g00079 ATGGACCCTGTATCTAGAAACATGACAATGATATGCCAAGATCCCCATAGCTCTAATCACAAGGATATCTGGCACTGGGGAAACCCTCTCGATTCCCCCACTCCCGTTCTCTTTATGCAGGTTTCTTTGATTACCATAGTCACACAGATCATGGATGTTTGTCTCAAGCCCCTAGGACAATCCTCCCTTGTTTCCCAGATTCTTGGCGGATTGATATTTGGGCCATCACTTTTCGGGCACAAGAAGGTGCTGTCAAATACCTTGTTCCCTATAAAAGGTGCTGTAGTGCTTGAGACATTGGCAACGTTTGGGATCATGTTCTTTTACTTCATATATTGTGTGAAGATAGATATTGTCACAATGCTAAGAACAGAAAGGCAGGCATTGGCTATTGGTATTTCTGTATTCTCAATAACATTAGGAATCCCAACTGGATTCTCCTTTCTGTTGAAGAAATATGTTTCCATGGAGAAGAGCCTCGCAGATTCTCTCACGTTTATAGCAGTCTCACAATCCTTAACTGCTTTTGTTGTCATATCAGTCCTCATGGCAGAGCTTAAAATCCTTAACACTGACGTAGGCCGTCTAACCATGTCTGCAGCAATGTTTGCCGATGTTTTTGGGTTTGCTGCGACAGCAATTATGTTTGCAGTAATGCAAAACTCTGGTGGTAATATCCTGTCAATATTATTTACCCTTCTATCCGTAGTTATGCTCTTCATTGTTATTATATATGTAATGCGGCCAGTGATACTATGGATCTTAGAGCGCTCAAAAGGGAAGCCGGTTGATGAATTACACATTGTTTGTATCTTTGTCTTCGTTCTCATAAGTGGATTTTTAAGTGAATTTGTTGGGCAGCATTTCATAATGGGACCATTAGTTTTGGGATTGGCTGTTCCAGAAGGGCCACCCTTAGGAACAGCTTTGATAACTAAAATGGAGACAGTCTCTGTGGCATTTTTGTATCCAATCTACTTGGCTGTTTGTGGACTGGAAACTGATATCTTCAAAATCAGGACTCGGTCATTGTGGGTTGTGAGTACCATAGTGCTTTGCGCTTGCTTTATGAAGATTGGTGCTGTAATTTTGTCCGGATATTATTACAAAATGCCCTTGAAAGAATCTTGTGTGATTGGGATCCTTCTAAATGCAAGAGGCATAGCAGAGCTTTCACTTTACAATATATGGAGGGCAGGCAAGGTAATCACGGGACAAGAGTTCTCTTTGCTGGTCATCTCCATTCTAGTGATAAATGCTATCATATCGCCACTGATAAAATTCTTATATGATCCTTCAGACCAATATCATAACGTAAGAAGATGTTCAATTCAACATACTAAGAGAGAATCCGAGCTTCGAGTCATGGTATGCATTCACAACAATGAAAATATCCCTACAATCATCAACCTCTTAGAAGCATCCTATGCAAGTAGAGAGAGCACCGTTGCAGTTATAGCACTAGTACTTGTAGAGCTTCTTGGAAGAGCAAGGCCTATTCTTGTTGCTCATCAAGCCCATGATACCCTGCGGTCAACCGCATGCAATTCAACTCAAATAGACAATTCCCTGAGACAATATGCACAGCAGAATGAAGGGTGTGCATCAGTTCAGTCTTTCACTTCAGTTTCCCTCTTTGATACAATGCATGACGACGTTTGCCGAATATCACTTGACATGAGAGCAAACCTTTTGATCATGCCATTTCACAAGCGATGGGAAATAGATGGTACCGTTCAGGTAGCCAATAGGGCCATCCAAACCATGAACATTAAAGTTCTAGAAAAAGCACCTTGCTCAGTGGGAATTCTCATTGATAGGGGTATCTTGTGTGGTTCTCAATCACTCTTGATTGCTAGAGCACCATACCGTGTTGCCGTGCTCTTCATTGGTGGTGCAGATGATGCAGAGACACTAGCCTATGGTACTAGGATGGCTAGGCATGAAAATGTGAACGTAACGGTGATTCGGTTCCTTCTATTCGGAGATGAAAACTCTAAAGACAGAAAACGTGACAGTGATATTATAGGTGAATATAGATATTATAATGCTGGAAATCGTCGCTTTGAAATCATGGAAGAAGTGGTCAAAGATGGTATAGAGATGTCATCGTGTGTCAGAAAATTGATAGATTATTTTGATCTAGTAATGGTGGGGAGGGAGCATCCAGAGTCTGTTCTGCTTCGTGGACATGACCAATGGAGTGAATGTCCAGAGCTAGGGGTTATTGGGGATATGATAGGTTCACAGGATTTTGTGACAAAGGCATCGGTGCTGGTGGTGCAACAACAAAGAATAAGAGGGAGGCTTGTTAAACACACTGCGAATCCAATGCCAAATCAAAGAGATCAGCTGGTACACGATGTTCCATTTGATGAAGTATCAAGAGCCTCATGTACAATTTCAGTGGACAGACATGATCAACGAATGTAG 2433 0.4168 MDPVSRNMTMICQDPHSSNHKDIWHWGNPLDSPTPVLFMQVSLITIVTQIMDVCLKPLGQSSLVSQILGGLIFGPSLFGHKKVLSNTLFPIKGAVVLETLATFGIMFFYFIYCVKIDIVTMLRTERQALAIGISVFSITLGIPTGFSFLLKKYVSMEKSLADSLTFIAVSQSLTAFVVISVLMAELKILNTDVGRLTMSAAMFADVFGFAATAIMFAVMQNSGGNILSILFTLLSVVMLFIVIIYVMRPVILWILERSKGKPVDELHIVCIFVFVLISGFLSEFVGQHFIMGPLVLGLAVPEGPPLGTALITKMETVSVAFLYPIYLAVCGLETDIFKIRTRSLWVVSTIVLCACFMKIGAVILSGYYYKMPLKESCVIGILLNARGIAELSLYNIWRAGKVITGQEFSLLVISILVINAIISPLIKFLYDPSDQYHNVRRCSIQHTKRESELRVMVCIHNNENIPTIINLLEASYASRESTVAVIALVLVELLGRARPILVAHQAHDTLRSTACNSTQIDNSLRQYAQQNEGCASVQSFTSVSLFDTMHDDVCRISLDMRANLLIMPFHKRWEIDGTVQVANRAIQTMNIKVLEKAPCSVGILIDRGILCGSQSLLIARAPYRVAVLFIGGADDAETLAYGTRMARHENVNVTVIRFLLFGDENSKDRKRDSDIIGEYRYYNAGNRRFEIMEEVVKDGIEMSSCVRKLIDYFDLVMVGREHPESVLLRGHDQWSECPELGVIGDMIGSQDFVTKASVLVVQQQRIRGRLVKHTANPMPNQRDQLVHDVPFDEVSRASCTISVDRHDQRM 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3462g00079 810 Pfam Sodium/hydrogen exchanger family 43 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi3462g00079 810 Gene3D - 36 438 IPR038770 -
Gabi3462g00079 810 PANTHER CATION/H + ANTIPORTER 11 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3462g00079 Gabi-Chr3462 929754 932777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3462g00079 5 763 Antiporter Super Family AT2G13620 36.675 2.68e-173 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3462g00079 K26731 - gmx:100779700 1129.78