Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3462g00070 ATGGAGAATAGGAATCTGACTTCAATATGCTTTGACCATGACCCTTATCAGATTTTGCAACTTGCGATGAGAAATGCAGCAGATTGGCACCATATTTCTGATAAGAAGAAAGAAAGATGGAAGACCGGGTCTAAGAGACACAACAACCCATGTTGTTTTTTAAGGTTGTTTCTCGGTTGGTTCTTATGGGTCCAATGTTTGTGGATTCTTCTACTCCCCACCTGTGTGAAGCCAGTTTTGGGAGATGATGAGCGTTGGGATGGAGTGGTTGTGACAGAGTCAAATTTCTTAGCACTTCAAGCATTCAAGCAAGAGTTGATTGATCCCAAAGGCTTCTTGAGGAGCTGGAATGACAGTGGTTATGGAGCTTGTAAAGGAGGTTGGATTGGTATTAAGTGTGCTCAGGGACAAGTTATTGTGATCCAGCTTCCATGGAAGGGATTGCGGGGACATATCACAGAGAAGATTGCCCAACTTCAAGGGCTCAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAGCACTGGGACTTCTTCCCAACCTCAGAGGGGTTCAGCTATTCAACAATCTCCTTACAGGGTCCATACCTCCTTCGTTAGGTTACTGCCCTTTGCTTCAATCTCTTGATCTCAGTAACAATTTACTCACAGGAAATATTCCTGATAGCCTTGCCAATTCCACTAAGCTTTATTTGCTTAACTTGAGCTTCAATTCCTTATCCGGTTCAGTACCAGCTAGCCTAACTCATTCAGTTTCTCTCACATTCCTTTCTCTTCAACACAATAATCTCTCTGGCTCCATTCCTAACTCATGGGGTGCTAGTCTGAAGAATGATTTCTTTCGGCTTGAAAATTTGATCCTAGATCATAACTTCTTCACTGGAAATATTCCTGCTTCTTTGGGCAGCTTAAGTGAGCTCAAAGAGATTTCCCTCAGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATAGGAACCCTTTCTAGGCTTAAAACATTAGACTTTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCTACCCTTTCTAGTTTATCCTCACTTACACTGCTGAATGTGAGGAACAACCACCTTGACAATCAAATTCCAGAAGCTTTTGGCAGATTACGTAATCTTTCTGTTCTAATTTTGAGCAGAAACCAATTTAGTGGTCATATTCCTTCAAGTATTGCAAACATTTCCACGCTTAAGCAGCTTGATTTGTCACTGAATAATCTCAGTGGTGAAATTCCAGTCTCCTTTGACACTCAACATAGTCTTAATCTCTTCAATGTTTCTTACAATAACCTCTCAGGTCCTGTTCCCACTCTACTTGCCAAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGATACAGCCCTTCAACCCCATGTCCTTCCCCAGCTCCACCTCCTGAAGTGTCAAAACACCACCATTATAGGAAATTAAGTACCAAAGACATAATTCTCATAGTAGCAGGAGCTCTCCTCATTGTTCTGGTAACACTTTGTTGCATCCTGCTCTTCTGCCTGATCAGAAAAAGAGCAACATCAAAGGCAGAGAATGGCCGAGCCACGGGGAGAGCTGCCGCTATGAGGACAGAAAAAGGAGTCCCTCCTGTTGCTGCTGGTGGTGAGGTTGAAGAAGGTGGTGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCAATGGCTTTTACTGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACCTATGGAACTGTGTATAAAGCTACATTGGAGGATGGAAGTCAAGTTTCAGTAAAGAGATTGAGGGAAAAGATCAGTAAAAATCAGAGAGAATTTGAATTAGAAGTTGGTGTTCTAGGGAAAATTCGACACCCAAATCTTTTGGCTCTAAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTACATGATCGTGGACCTGAAACATCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGGCATGACTCGTGGCTTGTTTTACCTTCATTCCCAGGAGAACATTATACATGGGAACCTTACATCAAGCAATGTCTTGCTTGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTAGGTTGATGACAACTGCTGCTAATTCTAACGTGATAGCTACTGCTGGAGCATTGGGCTACCGTGCTCCTGAGCTCTCAAAGCTTAAGAAAGCCAACACCAAAACTGATATCTACAGTCTTGGTGTTATTTTGTTAGAACTCCTAACGAGGAAGTCACCAGGGGTGTCTACCAATGGTGTAGATTTACCTCAATGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTCTTTGATGTGGAGTTGATGAGAGATGCACCAACAGTTGGTGATGAGTTGCTAAACACATTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCAAGACCAGAAGTTCAGCAAGTGCTCCAGCAGCTAGAAGAGATTAGACCAGAGAGATCAGTCAGTTCTGGGGACGATTTTAGCACCATGTAG 2604 0.4263 MENRNLTSICFDHDPYQILQLAMRNAADWHHISDKKKERWKTGSKRHNNPCCFLRLFLGWFLWVQCLWILLLPTCVKPVLGDDERWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGYGACKGGWIGIKCAQGQVIVIQLPWKGLRGHITEKIAQLQGLRKLSLHDNQIGGSIPSALGLLPNLRGVQLFNNLLTGSIPPSLGYCPLLQSLDLSNNLLTGNIPDSLANSTKLYLLNLSFNSLSGSVPASLTHSVSLTFLSLQHNNLSGSIPNSWGASLKNDFFRLENLILDHNFFTGNIPASLGSLSELKEISLSHNQFSGAIPNEIGTLSRLKTLDFSNNALNGSLPATLSSLSSLTLLNVRNNHLDNQIPEAFGRLRNLSVLILSRNQFSGHIPSSIANISTLKQLDLSLNNLSGEIPVSFDTQHSLNLFNVSYNNLSGPVPTLLAKKFNSSSFVGNIQLCGYSPSTPCPSPAPPPEVSKHHHYRKLSTKDIILIVAGALLIVLVTLCCILLFCLIRKRATSKAENGRATGRAAAMRTEKGVPPVAAGGEVEEGGEAGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVSVKRLREKISKNQREFELEVGVLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHDRGPETSIDWPTRMKIAQGMTRGLFYLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVILLELLTRKSPGVSTNGVDLPQWVASIVKEEWTNEVFDVELMRDAPTVGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPERSVSSGDDFSTM 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3462g00070 867 ProSiteProfiles Protein kinase domain profile. 581 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3462g00070 867 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 287 852 - -
Gabi3462g00070 867 FunFam Leucine-rich repeat receptor-like protein kinase 566 657 - -
Gabi3462g00070 867 SUPERFAMILY Protein kinase-like (PK-like) 585 853 IPR011009 -
Gabi3462g00070 867 CDD STKc_IRAK 587 852 - -
Gabi3462g00070 867 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 205 282 - -
Gabi3462g00070 867 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Gabi3462g00070 867 Pfam Leucine rich repeat 209 268 IPR001611 GO:0005515
Gabi3462g00070 867 Gene3D Transferase(Phosphotransferase) domain 1 659 864 - -
Gabi3462g00070 867 Gene3D Phosphorylase Kinase; domain 1 587 658 - -
Gabi3462g00070 867 SMART LRR_typ_2 380 403 IPR003591 -
Gabi3462g00070 867 SMART LRR_typ_2 356 379 IPR003591 -
Gabi3462g00070 867 SMART LRR_typ_2 332 355 IPR003591 -
Gabi3462g00070 867 SMART LRR_typ_2 183 207 IPR003591 -
Gabi3462g00070 867 SMART LRR_typ_2 308 330 IPR003591 -
Gabi3462g00070 867 SMART LRR_typ_2 159 182 IPR003591 -
Gabi3462g00070 867 SUPERFAMILY L domain-like 132 469 - -
Gabi3462g00070 867 FunFam Leucine-rich repeat receptor-like kinase 94 204 - -
Gabi3462g00070 867 Pfam Leucine rich repeat N-terminal domain 97 133 IPR013210 -
Gabi3462g00070 867 FunFam Pollen receptor-like kinase 1 658 863 - -
Gabi3462g00070 867 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 283 476 - -
Gabi3462g00070 867 Pfam Protein tyrosine and serine/threonine kinase 584 849 IPR001245 GO:0004672|GO:0006468
Gabi3462g00070 867 Gene3D Ribonuclease Inhibitor 93 251 IPR032675 -
Gabi3462g00070 867 Gene3D Ribonuclease Inhibitor 252 348 IPR032675 -
Gabi3462g00070 867 Gene3D Ribonuclease Inhibitor 349 475 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3462g00070 Gabi-Chr3462 843193 845902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3462g00070 86 854 Receptor kinase-like Gene Family AT3G51740 65.212 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3462g00070 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3462g00070 - - aprc:113851294 1350.5