Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3462g00031 ATGCATAGCTTCAAGACAGCTGAAGCAAGCTCCCAACTCTATTGCCACTCCTCCTTCTTGCTTCGTGGTGACGACACCAACCGAAACCAAACGCGTTTCTCTGATCTTGGGGAGCTTCAGCATTCCTCTGCTGTCTTTCAACAAGAACATGCGGTTGATTTATCCTCGAGCTCTATGTATAGTGTGAAGTCAAGCAATGTTGTTGTTGGTAGTAGTAACATGCAGTATGGGACAATGAACACGAATCTTGGGTCTGCAGAGATAGGTTCAACAGGGGTAGGGTGCTTGGATACTGGGCAACAACTCATGTACCACAAGGAAATGGCCATGGCCACCTTGCCTTTGGGGAATGGTCATGTTGAGAATTGGGCTGATTCAGGCATGGCAGATAATAGCCAACAGACTGATGATACTTCCACTGATATTGACACTGATGACAAAAACCAATGCAATAGTGTAAAGAATGGGGCACGTGTGGTTGTGGACTCCAAGGATCAGACAAAGTTCAAAGCAGGAGATCAGAAGACCCTTCGTAGGCTAGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTGCAGCAGTTGGAGAACAGCCGGCTCAAGCTTGCGCAAATAGAGCAAGAGCTTCAACGAGCACGTCCGCAGGGTATATTTATTGCAACTCCTGGGGATCAAGGTCATTTGGCTGTTGGAAATGGTGCCTTAGCATTTGACATGGACTATGCCCGCTGGGTTGATGAGCATCAACGTCTGCTGAATGAGCTAAGATCAGCTTTAAATTCTCAAATGGGTGATAATGAACTACATCTTCTTGTTGATGGTGTCATGGCACATTATGATGAATTGTTTAGGTTAAAGAGCATAGGGGCAAAGGCTGATGTGTTTCACATGCATAGTGGGATGTGGAAGACACCTGCAGAAAGATGGTTTATGTGGCTTGGTGGATTCCGTTCATCTGAACTTCTCAAGATAATCAAGAACCACCTTGAGCCCTTAACAGAACAGCAAGTGATGGGCATTGATAATCTGCAACAGTCTTCTCAGCAGGCTGAGGATGCTTTAACTCAAGGTATGGAAGCATTGCAACAATCTGTTTTAGAGACACTTTCTTCCACCTCCTTAGGACCCACTGGTGCTGGAAATGTTGCTGATTACATGGGCCAAATGGCAATTGCAATGAGCAAACTTGCTCCAGTGGAGAATTTCCTTCGCCAGGCTGATCTCTTGAAGCAACAAACTCTGCAACAATTGCAACGAATTTTGACCACGCGTCAGATTGCTCGGGCCCTCATTGTCAGAAATGATTACCTTTCAAGACTAAGAGCACTTAATTCATTATGGTTAGCTCGCCCTAGAGAGTAG 1380 0.4572 MHSFKTAEASSQLYCHSSFLLRGDDTNRNQTRFSDLGELQHSSAVFQQEHAVDLSSSSMYSVKSSNVVVGSSNMQYGTMNTNLGSAEIGSTGVGCLDTGQQLMYHKEMAMATLPLGNGHVENWADSGMADNSQQTDDTSTDIDTDDKNQCNSVKNGARVVVDSKDQTKFKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLAQIEQELQRARPQGIFIATPGDQGHLAVGNGALAFDMDYARWVDEHQRLLNELRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMHSGMWKTPAERWFMWLGGFRSSELLKIIKNHLEPLTEQQVMGIDNLQQSSQQAEDALTQGMEALQQSVLETLSSTSLGPTGAGNVADYMGQMAIAMSKLAPVENFLRQADLLKQQTLQQLQRILTTRQIARALIVRNDYLSRLRALNSLWLARPRE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3462g00031 459 MobiDBLite consensus disorder prediction 124 149 - -
Gabi3462g00031 459 CDD bZIP_HBP1b-like 175 227 - -
Gabi3462g00031 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Gabi3462g00031 459 Pfam bZIP transcription factor 175 204 IPR004827 GO:0003700|GO:0006355
Gabi3462g00031 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Gabi3462g00031 459 Gene3D - 174 222 - -
Gabi3462g00031 459 ProSiteProfiles DOG1 domain profile. 240 456 IPR025422 GO:0006351|GO:0043565
Gabi3462g00031 459 Coils Coil 194 218 - -
Gabi3462g00031 459 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Gabi3462g00031 459 FunFam BZIP family transcription factor 174 223 - -
Gabi3462g00031 459 PANTHER TRANSCRIPTION FACTOR TGA9 108 459 - -
Gabi3462g00031 459 SUPERFAMILY Leucine zipper domain 175 217 IPR046347 GO:0003700|GO:0006355
Gabi3462g00031 459 SMART brlzneu 171 240 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3462g00031 Gabi-Chr3462 340325 343599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3462g00031 3 459 bZIP Transcription Factor Family AT1G68640 57.505 8.98e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3462g00031 DOG1 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3462g00031 K14431 - gmx:100777181 694.501