Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3457g00007 ATGGCCACGGAAAAACTTAGATGTGTAGCAAACTTCCTTGAGAACTCTAAACACCACTTTGCCATGATCGCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCGAGGCATGAGCCACTATGTCCTTGTTGTTTACCGTCACGCTTTTGCAACTGCTGTCATAGTTCCATTCGCTTTCATCTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTCATCCTAGCTCTGCTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTGACATCACCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCCATGACTTTTGTGATGGCCGCTTTATGCCGGATGGAGAAGATCAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGATAGGAACCATGGTGACGGTGGCTGGGGCCATGTTGATGACCTTGTACAAAGGCCCTATTGTGGAGATGATGTGGAACAAACATGCACCTCATAGTGAAACCAATGCAACAAACACCACACGATCCTCAGACAAGGATTGGTTCATAGGCTCAGTCTTCCTATTCATTGCAACGCTTGCTTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCAATAGATACGTACAAAAATCATCATCTAAGCCTCACATCACTTATCTGCTTTATTGGGACACTTCAAGCTACTGCTGTTACTTTTGTTATGGAACACAAGGCTTCTGTGTGGACAATTGGCTGGGATATGAACTTACTTGCCGCTGCCTATGCGGGGATTGTTACATCAAGCATATCATACTACGTACAAGGGTTGGTAATTAAGAAGAAAGGGCCTGTTTTCGCAACTGCATTTAGCCCTCTAATGATGATCGTTGTAGCCATCATGGGCACTTTTATCCTTACAGAGCAGATTTATCTTGGAGGTGTTATTGGTGCCATCTTGATTGTCATAGGTTTATACTCTGTTTTGTGGGGAAAGCACAAAGAACAAGTGGAGAACAAAGTGGCAGAGGATATACCCTTGCCTGTAAAGGGTGTTCAAGTTGATGGAAATCCAGAAGCACTCATTGATTCCACTGATCAATTTGCTGAAACACAATCAAATCCAAAAGCAGAAGCCAACAAGCTCTCTTCAATTGTTATTAGCATCCCTAAGCCTCCTACAAAAGCTAACCAAGAAGCAAAGGCATAA 1221 0.4292 MATEKLRCVANFLENSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIVPFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAALCRMEKINMKKVRCQAKVIGTMVTVAGAMLMTLYKGPIVEMMWNKHAPHSETNATNTTRSSDKDWFIGSVFLFIATLAWASLFVLQAKAIDTYKNHHLSLTSLICFIGTLQATAVTFVMEHKASVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIVVAIMGTFILTEQIYLGGVIGAILIVIGLYSVLWGKHKEQVENKVAEDIPLPVKGVQVDGNPEALIDSTDQFAETQSNPKAEANKLSSIVISIPKPPTKANQEAKA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3457g00007 406 PANTHER WAT1-RELATED PROTEIN 20 344 IPR030184 GO:0016020|GO:0022857
Gabi3457g00007 406 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020
Gabi3457g00007 406 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Gabi3457g00007 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Gabi3457g00007 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3457g00007 Gabi-Chr3457 63163 65980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3457g00007 1 398 Nodulin-like Gene Family AT5G07050 64.677 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3457g00007 - - gmx:100804359 655.981